Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6549 98.7 1e-15 >seq6549 Length=834738 Score = 98.7 bits (108), Expect = 1e-15 Identities = 190/277 (69%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| ||||||| | ||||| || ||||| || || | || | || || ||||| Sbjct 419632 CGTGAAAATGTATCTCGGACTGGCGGCGTCCTTTCCGCCAGAAAGTCTTGTACCGAACTG 419573 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || ||||| | || || | ||||||| ||||||||||||||| || | ||| | Sbjct 419572 ACCGATGGGCTGCAACAGATTAATGTTGTTGCTGCCCACGAAATTCTGCGCGAGATTGAT 419513 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || || || ||| || || ||||| || || |||| ||||| |||| | || Sbjct 419512 TATGGTCGCCATCAGGGACGTCTCGCCGTGATGGTAAGCCGAATGCTCGGCGACCGAGCC 419453 Query 152208 CGCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 ||||||||| || ||||||| || || | ||| ||| ||| | ||||| | | || Sbjct 419452 CGCCAACTGTGCGACCTTCACCTCGCGTTTGTC--GTTGCGCTTCAAACAGGTGAACATT 419395 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGT 152302 || || | ||| || || || ||||||| || || Sbjct 419394 ACTTTCCTCTGTCCCGGCTTGAAGCCGTCCATCATGT 419358 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||||||||| | | || || || ||||| || |||| ||| | |||||||| || Sbjct 419631 GTGAAAATGTATCTCGGACTGGCGGCGTCCTTTCCGCCAGAAAGTCTTGTACCGAACTGA 419572 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || | |||| ||| || || | ||||||| |||||| || || || || | |||| Sbjct 419571 CCGATGGGCTGCAACAGATTAATGTTGTTGCTGCCCACGAAATTCTGCGCGAGATTGATT 419512 Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484 || || | ||| || ||| || || || || |||| ||||| || || ||||| Sbjct 419511 ATGGTCGCCATCAGGGACGTCTCGCCGTGATGGTAAGCCGAATGCTCGGCGACCGAGCCC 419452 Query 117485 GCCAGCTGAGCCACCTTCA 117503 |||| ||| || ||||||| Sbjct 419451 GCCAACTGTGCGACCTTCA 419433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546683914522400