Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6583 113 4e-20 >seq6583 Length=1017230 Score = 113 bits (124), Expect = 4e-20 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 30205 CCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCC 30264 ||| | ||| |||| |||||| |||| || || || || |||| ||||||||| || Sbjct 910582 CCCAGTGTAATCTGTGTGCATGTCTTTGTATTCAGCCCCAAAGTGCCGCCACTGGAAACC 910641 Query 30265 GTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTC 30324 ||| || ||||||| || ||||| || || | |||||| ||||| || | Sbjct 910642 GTAGACAGGTCCCAAATCGCCCTCCTCTCTATCGGTGAAGCCGTAGGAGTCCAGGAAAGC 910701 Query 30325 TCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGT 30384 || || || || ||||||| || | || || || | | ||||| ||||| ||||| Sbjct 910702 TCGCGAGCCATTTTCGTCCCAAATATGAACACCTTTAGCCGTTAGCTCCTTGGAATTTGT 910761 Query 30385 GGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGT 30444 || ||| ||| |||||||||||| ||||| || || || ||| || |||| || || Sbjct 910762 CGATCCTTTGATGAACCACAGCAGTTCCTCGACCACCGCTCGCCAGAACACCCGTTTAGT 910821 Query 30445 CGTGAGGAGGGGAAA 30459 || || || ||||| Sbjct 910822 TGTCAGTAGTGGAAA 910836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004 |||||||| ||||| |||||||| ||||| || ||||| || |||||||| || ||| Sbjct 910208 CCGGTGACATGAGCGATCATGTAGGTGAGCAGGGAGTACGACGCTATGTTAAACGGCACC 910267 Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACG 30064 || || ||||||||| | |||||||| ||||| || | || |||| | ||| Sbjct 910268 CCCAGACCCATGTCCGCGCTTCTCTGGTAAAGCTGCGCGGACAATTCGCCGTTATTTACG 910327 Query 30065 TAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 || ||||| | ||||||||||| || | ||||| Sbjct 910328 TAGAACTGTACGAAAGCGTGGCACGGCGGCAATGCCAT 910365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405925200980496