Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq34430 141 6e-29 seq34431 136 2e-27 seq6476 136 2e-27 seq6559 116 2e-21 seq61286 111 1e-19 seq61987 93.3 3e-14 >seq34430 Length=319 Score = 141 bits (156), Expect = 6e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| |||||||| ||||||||||| || ||| || || |||||||||||||| Sbjct 309 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 250 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | ||||| ||||| || |||||||| || |||||||| || || || || Sbjct 249 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGG 190 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || || |||||| |||| || | ||| ||| | ||||||||| | || | Sbjct 189 AATGCCTTCTTTGTCTTGGATC-TTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 131 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | ||| || ||||| ||||| | |||||||| || || |||||| Sbjct 130 CTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATG 81 >seq34431 Length=440 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| |||||||| ||||||||||| || ||| ||||| |||||||| || || Sbjct 430 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGA 371 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | ||||| ||||| || || || || || ||||||||||| ||||| || Sbjct 370 AAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGG 311 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || || |||||| |||| || | ||| ||| | ||||||||| | || | Sbjct 310 AATGCCTTCTTTGTCTTGGATC-TTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 252 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || ||||| ||||| | |||||||| || || ||||| Sbjct 251 CTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 Score = 113 bits (124), Expect = 3e-20 Identities = 150/203 (74%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| |||||||| |||| || || || |||||||||||||||||||||||| Sbjct 201 CCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGAA 142 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | ||||| ||||| || |||||||| || | ||||||||| ||||| || Sbjct 141 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGGA 82 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || || |||||| |||| || | ||| ||| | |||||||| ||| || | Sbjct 81 ATGCCTTCTTTGTCTTGGATC-TTGGCTTTTACGTTCTCGATTGTGTCAGATGCT-TCAA 24 Query 34658 CTTCCACGGTTATCGTTTTACCG 34680 |||| | ||| || ||||| ||| Sbjct 23 CTTCGAGGGTGATGGTTTTGCCG 1 >seq6476 Length=10381176 Score = 136 bits (150), Expect = 2e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| |||||||| ||||||||||| || ||| || || |||||||||||||| Sbjct 5657133 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 5657074 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | ||||| ||||| || |||||||| || | |||||| || ||||| || Sbjct 5657073 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGG 5657014 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || || |||||| |||| || | ||| ||| | |||||||| | || | Sbjct 5657013 AATGCCTTCTTTGTCTTGGATC-TTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAA 5656955 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | ||| || ||||| || || | ||||||||||| || ||||| Sbjct 5656954 CTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||| || || || || ||||| || || ||||| ||||| ||||| | Sbjct 5657362 CGCCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGG 5657303 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||| |||| ||||||| || || || || || || || ||||||||||| ||||| | Sbjct 5657302 AAAGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTG 5657243 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCC 34656 | | ||| || ||||| ||| ||| | || ||| | |||||||| | || Sbjct 5657242 GAATTCCTTCTTTGTCCTGGAT-TTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCA 5657184 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | ||| || ||||| ||||| | |||||||| || || |||||| Sbjct 5657183 ACTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATG 5657133 >seq6559 Length=1815223 Score = 116 bits (128), Expect = 2e-21 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || ||||||||||| || | || | || || ||| ||| || |||||||| ||||| Sbjct 1626025 TCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCA 1625966 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 |||||||| || |||| || || ||||||||||| || ||||| | ||| || || || Sbjct 1625965 GAAAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGA 1625906 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCT 34654 || | || || |||||| ||| ||| | || ||| | || ||||| ||| || Sbjct 1625905 GGAATACCTTCTTTGTCT-TGAATTTTCGCCTTCACGTTTTCGATCGTGTCAGACGC-CT 1625848 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||||| || || || || || || || ||||| || ||||||||||| Sbjct 1625847 CAACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625796 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| |||||||| | ||| || ||||||||||| ||||| ||| Sbjct 1625338 CCACCACGAAGTCTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAA 1625279 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || ||||||||||| || || || | ||| || || || || Sbjct 1625278 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625219 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||| ||||| || ||| ||| | ||| ||| | || ||||| ||| || Sbjct 1625218 ATTCCTTCCTTATC-CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAAC 1625160 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 1625159 CTCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 104 bits (114), Expect = 1e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||||||||||||| ||||| || || || || || || || || || |||| || Sbjct 1624408 ACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGACAGGGTGCGGCCGTCCTCG 1624349 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || || || || |||||||| || || ||||| | ||| |||||||| || Sbjct 1624348 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATTCCTTCCTTGTC-CTG 1624290 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| || ||| | || ||||| ||| ||||| | ||||| || || Sbjct 1624289 AATCTTTGCCTTCACGTTCTCGATGGTGTCGGAAGCCTCAACTTCAAGAGTTATGGTCTT 1624230 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || |||||||| ||||| || ||||||||| || Sbjct 1624229 CCCAGTTAACGTCTTCACGAATATCTGCATGGTG 1624196 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| || | ||| || ||| ||||| |||||||| || || || Sbjct 1625566 CCTCCGCGAAGTCTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625507 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || |||| || || ||||||||||| || || || | ||| || || || || Sbjct 1625506 AGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625447 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| ||| | ||| || | |||||||| ||| || Sbjct 1625446 ATACCTTCCTTGTC-CTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAAC 1625388 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || |||||||| || | ||| || || ||||||||||| Sbjct 1625387 CTCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| || ||||| | ||| || || |||||||||||||| || Sbjct 1625110 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 1625051 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || |||||||| |||||||| || || | || || || || || Sbjct 1625050 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGG 1624991 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCA 34657 | ||| ||||||||| ||| ||| | ||| || | || |||||| ||| ||| | Sbjct 1624990 ATTCCTTCCTTGTCT-TGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGC-CTCAA 1624933 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || || || || || || || ||||| ||||| Sbjct 1624932 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550 ||| | ||||||||| | ||| ||||| ||||| || || || |||||||| || | Sbjct 1624871 ACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGACC 1624812 Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610 || || || ||||| |||||||| || || | |||||||||||| || | || || || Sbjct 1624811 ATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGAATGCCTTCTTT 1624752 Query 34611 GTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGGTT 34668 ||| ||| ||||| ||| || | ||||||| | ||| || || |||| || Sbjct 1624751 GTC-CTGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCT-TCAACCTCCAAAGTG 1624694 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | ||||| || || |||||||| Sbjct 1624693 ATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| |||| ||| || ||| ||||| |||||||| || || || Sbjct 1625794 CCTCCACGAAGCCTCAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625735 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || |||| || || |||||||| || || || || | ||| || || || || Sbjct 1625734 AGTGTGCGGCCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625675 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTT-CGCTCTCCA 34657 | || || ||||| ||| ||| | || || | || ||||| ||| ||| | Sbjct 1625674 ATACCTTCTTTGTCC-TGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGC-CTCAA 1625617 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || || || || ||||| || ||||||||||| Sbjct 1625616 CTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 >seq61286 Length=444 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| |||||||| | ||| || || |||||||| ||||| ||| Sbjct 166 CCACCACGAAGTCTCAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAA 225 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || |||||||||||||| || || | ||| || || || || Sbjct 226 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGG 285 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | ||| ||||| || ||| ||| | ||| ||| | || ||||| ||| ||| | Sbjct 286 ATTCCTTCCTTATC-CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGC-CTCAA 343 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || || || || ||||| || ||||||||||| Sbjct 344 CTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq61987 Length=372 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | ||| || ||||| | ||| || || |||||||||||||| || Sbjct 62 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 121 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || |||||||| |||||||| || || | || || || || || Sbjct 122 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGG 181 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | ||| ||||| || ||| ||| | ||| || | || ||||| ||| ||| | Sbjct 182 ATTCCTTCCTTATC-CTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGC-CTCAA 239 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || || || || || || || ||||| || ||||||||||| Sbjct 240 CTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314431223356604