Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq43336 318 6e-82 seq1998 226 3e-54 seq1985 196 5e-45 seq37382 111 2e-19 seq1991 107 2e-18 seq39135 91.5 1e-13 seq37313 91.5 1e-13 >seq43336 Length=1079 Score = 318 bits (352), Expect = 6e-82 Identities = 358/476 (75%), Gaps = 6/476 (1%) Strand=Plus/Plus Query 54278 GCTACATTCGCACCCGCGAGTCGTAAGCAACAGATGGTTCTCGAATCCAAAGCACAGATC 54337 || || ||||| ||||| ||| ||| ||||||||| | || |||| | || |||| Sbjct 606 GCCACGTTCGCTCCCGCCAGTATTAAACAACAGATGATCCTTAAATCAGACGCTGAGATT 665 Query 54338 CTCGTAATGGGGGGCGCAGCAGGCTCAGGTAAATCATACCTGCTCCAGTTGATGCCTCTG 54397 || | || || || || || || ||||| || || || ||||| ||||| ||||||||| Sbjct 666 CTAATCATCGGCGGTGCTGCTGGTTCAGGGAAGTCCTATCTGCTTCAGTTAATGCCTCTG 725 Query 54398 CTGATCATCGACGATCCCCGTACAGCTTGTATCATGTTCCGCCGTACAGTGCCTCAGATT 54457 | || || ||||| || || ||||| ||| ||||||||||||| |||| || ||| | Sbjct 726 TTTATTATTGACGACCCGCGAACAGCCTGTGTCATGTTCCGCCGATCAGTACCACAGCTA 785 Query 54458 CGTGGTCAGGGCGGTCTGTTCGACAAAGCGAAAGATATTTACAACCAGCTTCCCCCGGTC 54517 |||||||| || |||||||| ||||| || ||||||||||| ||||| || | ||| Sbjct 786 CGTGGTCAAGGTGGTCTGTTTGACAAGGCTAAAGATATTTATAACCAACT---CGATGTC 842 Query 54518 G--TCAAGCCCAAG-TTCAAAGAGAACGAGATGATTGCGACATTCCCCAATGGGGCGACG 54574 || | ||| | || ||||| |||||| || |||||| || ||||| | Sbjct 843 AACTCTAAACCACGATTTCGTGAGAATGAGATGGAAGCTTTATTCCCAAACGGGGCTAAA 902 Query 54575 GTGAAGTGGCAGTCCATGCAGCACACCAACGACAAGTACAACATCCAAGGTCTGGAATTT 54634 || ||||||||||| ||||||||| || ||||| |||| || || || |||||| Sbjct 903 GTTAAGTGGCAGTCGATGCAGCACGTAAAGAACAAGCTTGACATTCAGGGCCTAGAATTT 962 Query 54635 ACTTTCATCGGTGTGGACGAAGGAACCCAGTTTGAATGGGAACAGCTTGAGTACATGATG 54694 ||||| || || || ||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 963 ACTTTTATAGGCGTAGACGAAGCCACCCAGTTTGAATGGGAACAGCTCGAATACATGATG 1022 Query 54695 TCGCGTTTGCGTTCAAACTCAAAGTATCCTTCCCGCATGGTTATCTCTTGTAACCC 54750 || |||||||||||| || || || || ||||| |||||||| || |||||||| Sbjct 1023 TCTCGTTTGCGTTCATCTTCTAAATACCCGTCCCGAATGGTTATGTCATGTAACCC 1078 >seq1998 Length=468 Score = 226 bits (250), Expect = 3e-54 Identities = 293/403 (73%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 56462 GGTGTTTCTCCGCTGGTAGGCTGCTACCGTGCATGGCGTGAGAAAATCCTCATTGAGAAC 56521 |||||||| || || || || || ||||| || | || || || | || ||||||||| Sbjct 402 GGTGTTTCACCTCTAGTTGGTTGTTACCGCGCTTTCCGAGAAAAGGTTCTTATTGAGAAC 343 Query 56522 TTGGAAGTTGTTGGTGCAACAAAGGACATGGGTGGTGTGATCGAATTGAAGATCCCCTCC 56581 |||||||| | || ||||| |||||| | || || | || || | ||||| || ||| Sbjct 342 TTGGAAGTCATCGGGGCAACTAAGGACCTCGGCGGGATCATTGAGCTTAAGATTCCTTCC 283 Query 56582 CAGATCCTGAACAAGGCTGCAATGGACCCTTCTTCTCCGGAAGCGGATATGGTGCGTGGC 56641 ||||| |||||||| ||||| ||| | || ||||| || ||||| || Sbjct 282 AGTATCCTTAACAAGGCAGCAATCGACAAGAATAGCCCAGAAGCTGAAATGGTTGAAGGA 223 Query 56642 TTGATGTCCGATGCTGCAAACGCCCACTCTGGCGAGCAGTCATTCTTCATGCTGCCTTCT 56701 |||||| ||||| || ||||||||| | || |||||| | ||||||||| |||| || Sbjct 222 TTGATGCAGGATGCGGCTAACGCCCACGCAGGTGAGCAGGCCTTCTTCATGTTGCCGTCA 163 Query 56702 GACACCAAGGACAACGCCCCTCAGTATTC--CATGACCCTGAAAGGGATCGATGGGATGG 56759 || | ||||| |||||||| || |||| |||||| || ||||| ||||| || | Sbjct 162 GATATGAAGGAAAACGCCCC--AGCATTCTCCATGACACTTAAAGGTATCGAAGGTTCCG 105 Query 56760 GCAAGCAGTACAGTACCGCACAGTTGATTAGCGACCGTAAGAAGTCAATCCTTGATCGAC 56819 | |||||||| || || || | || || || ||||||||||| ||| | || || Sbjct 104 GTAAGCAGTATAGCACTTCAGCCCTAATCAGTGAACGTAAGAAGTCTATCTTGGACCGCT 45 Query 56820 TCGGTGCAGGCTTCATCAACGTAGGTAACGACAAAGGCGGATC 56862 |||| || ||||| || ||||||||||| ||||||||||| || Sbjct 44 TCGGCGCTGGCTTTATGAACGTAGGTAATGACAAAGGCGGTTC 2 >seq1985 Length=318 Score = 196 bits (216), Expect = 5e-45 Identities = 205/270 (76%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 70311 AGGTAAAACTTCTTCTGGGCAGTACGTTGACGTGATTCGCTTCTCCCACTGGGTTAAATT 70370 ||||||| ||||||||| | ||| | |||||| || ||||| ||||||||| | || || Sbjct 303 AGGTAAATGTTCTTCTGGTCNGTATGCTGACGTTATCCGCTTNTCCCACTGGTTGAAGTT 244 Query 70371 CCGTATGGAAGAATCCGTGTTCGCGTACATGAAGCGCCGTTCTGACATGGGTCTGTCCAT 70430 |||||||||||| || || ||| | |||||| | | || || |||||||| ||||||| Sbjct 243 CCGTATGGAAGAGTCAGTATTCTCCTACATGCACCAGCGCTCAAACATGGGTATGTCCAT 184 Query 70431 GAAGATGAGCGACGAAGACCTGCCTGTACTGAAGTCTGTTCTGATGAACAACCCGATCAA 70490 ||||||||||||||| ||| |||| |||| |||| | ||||| | || || || Sbjct 183 GAAGATGAGCGACGATGACTTGCCAAACCTGAGCACTGTGATCCTGAACGATCCTATTAA 124 Query 70491 CATCGGTATTCGTAATGGTGGTATTCTGACTGGCTACGACGCTGAAAACAAAGTGTCCTA 70550 | | ||||||||||||||| || | || || || || | |||||||| || | ||| Sbjct 123 CGTAGGTATTCGTAATGGTTCCATCTTAACCGGATATGATGAGGAAAACAAGGTCTTCTA 64 Query 70551 CGACCCGACGATCACTATTCCGAAACGCGC 70580 |||||| | ||||| ||||| ||||| || Sbjct 63 CGACCCAATCATCACCATTCCAAAACGAGC 34 >seq37382 Length=576 Score = 111 bits (122), Expect = 2e-19 Identities = 345/522 (66%), Gaps = 14/522 (3%) Strand=Plus/Minus Query 113030 ACCCATCTTAACCCCGGCACCGACGAACATACCTTCCCCGAGACGACGGCCCAACGTCAG 113089 |||||| || || || ||||| | ||| ||| || |||| ||| ||||||| ||| Sbjct 517 ACCCATTTTTACACCAGCACCAATGAAGTAACCCTCACCGATACGTCGGCCCAGAGTCTT 458 Query 113090 GCGCGTCATTGTAGGCCAAGGCCA-TTTCTTCCCGAGTTTAGGGATCTCGTGTGCCTTCT 113148 ||||| |||||||||||||| | ||| || ||||||||| || || || Sbjct 457 CTTGGTCATGGTAGGCCAAGGCCACGGACGGCCCAAG-ACAGGGATCTCTTGAGCTTTAG 399 Query 113149 CACGGAACTGAGAGTAGG-TCGCAAAGCCGTCCGGCACGTACTCTTTCGGCTTCATCGCT 113207 ||||| ||| |||| ||| ||| ||||| || | |||||| | || ||||| | Sbjct 398 TACGGATCTGCTCATAGGTTCGGAAA-CCGTCAGGGATGTACTCGATAGGTTTCATGATT 340 Query 113208 GCCCAGAAAAGCTGCTGCGCCAAGCCCTTATTGTACATGTCGCAAGGGTCCATGTCTTCA 113267 | |||||| | ||| | |||| || | |||||| || || || ||| | || || Sbjct 339 GACCAGAACAACTGGTTAGCCATACCTTCGCCGTACATATCACACGGATCCTTATCATCT 280 Query 113268 GGGATATCGACGACTTTCATCTGTGGGATGACAGAATACACTGCCGCCACGGCATCTTTG 113327 || | || | || |||||| || || | |||||| || || || ||||| Sbjct 279 GGCAGGTCAGCTACACGCATCTGAGGAATAAGAGAATAAACCTGAGCTGTTGCCTCTTTA 220 Query 113328 CCCTTCATGATACCCTTGGCT--TTCTCAGTTTCGTTCGCCCGGTCGGCGTCGAAAGCCA 113385 || || || ||||||| ||| ||||| | || | ||| || || || ||| || Sbjct 219 CCTTTGATAATACCCT--GCTGCTTCTCCGCATCAGTTGCCTTATCCGCATCAAAA--CA 164 Query 113386 CAAT--GATCTCTTCGAACTTGCTCAGGAGCTTATAGTTGTTCTTCTGAGACAGGTTCTG 113443 |||| ||||| |||| ||| || ||| ||| |||||||| || ||| | Sbjct 163 CAATACGATCTGTTCGTGCTTCTCCACATATTTAAGGTTCTTCTTCTGGCCCAAGTTACG 104 Query 113444 TACTGCGTTGGATGTGCCGTTGGAGATTGACACAACCGTGAAGTTAGGCTTACGGGCATT 113503 || || ||||| ||||||||||| | || | ||||| ||| |||||| | | Sbjct 103 GACAGCATTGGAAGTGCCGTTGGATACGGAGATTACCGTTGGGTTGATCTTACGAGTGCT 44 Query 113504 GCCGTC-CTTCGATTTGTAGTTCTCGCGGAGAACCTGCCACA 113544 || || | || ||| |||||||| || | | ||||||| Sbjct 43 ACCATCACGTC-CTTTATAGTTCTCTCGCATGGCTTGCCACA 3 >seq1991 Length=333 Score = 107 bits (118), Expect = 2e-18 Identities = 122/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 26164 GCCACGTTAGGATGGAACAATGTGATGTTCTTACCCTGCTGGAGGCGAGAGTACAGCATT 26223 |||||||| |||||||||| | ||| || || ||| || || |||| || Sbjct 160 GCCACGTTCGGATGGAACAGGGAGATTTTACCTCCAGTCTGAAGACGCTTATACATCAAC 101 Query 26224 TTGTTCAACTGAAGCCCGTAGTCCACATGGCGAGCACGAGTGCTCT-CAGTACCACGGTT 26282 |||||||| || | |||||||| ||||||||| |||| || |||| | || || ||||| Sbjct 100 TTGTTCAATTGCAAGCCGTAGTCAACATGGCGAACACGTGT-CTCTTCTGTTCCTCGGTT 42 Query 26283 GTTCTTCAGCACAATCAGGCTTTCAAAATCCCAGTGCCACA 26323 ||||| || |||||||| |||||||||||||||||||| Sbjct 41 ATTCTTAAGGACAATCAGCTCTTCAAAATCCCAGTGCCACA 1 >seq39135 Length=635 Score = 91.5 bits (100), Expect = 1e-13 Identities = 222/335 (66%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 76954 CGTGGGAAGGTGGTTGGGGTGAACTACAGTGGACCGTCTGTTGATGTTCAACCGATGGCC 77013 ||||| ||||| || || || | ||| ||||| | ||||| |||||||| ||||| Sbjct 462 CGTGGCAAGGTTGTAGGTGTAGATTACTCAGGACCTACGGTTGACGTTCAACCTATGGCT 403 Query 77014 TACACAGAGTTCCCTTCTGGAACCAC---AGACCGATACCCGGTTATTTATGATGTCCCC 77070 | |||| ||| ||||| ||| |||| ||||||| || | | |||| || Sbjct 402 AAGACAG---TCCTTTCTGACGGCACTGAAGACGGATACCCTACCATCTTTAATGTTCCG 346 Query 77071 GTCCTGTTGCCGTCAGGCGCAGGGGGTAAGGCCCGCCTGACCATGCCGATTAAGCCCGGC 77130 || | | ||||||| || || ||||| ||||| ||||||||||| ||| || Sbjct 345 GTACAACTACCGTCAGCTAATGGAGGAAAGGCTCGCCTAACCATGCCGATCAAGGTTGGT 286 Query 77131 GACGTGGTAGGTCTCTCCTTCTCTGAGCGGAACGAGGGGGACAATAACGATCAGAACACT 77190 || |||| || | |||||| ||| | ||||| | || | ||| || | |||| Sbjct 285 GATATGGTTGGCATTAACTTCTCAGAGAGAAACGAAGATAACTCTTCCGACCAAAGCACT 226 Query 77191 CACCAACTGTTTGCCGGGTGGGCCGTCACCCAGATCTTCACCGATGGCAACTCAAAGGCG 77250 || | |||| || || | || ||||| |||||| ||| | ||| | || | Sbjct 225 CATGGATTGTTCGCAGGTTTCGCTGTCACTGAGATCTACACACCAGAAAACGCTAAACCT 166 Query 77251 ATTCATCCAGACAACGTTGTCTTGGAGAACGATAA 77285 || | || || || || ||| | ||||||||||| Sbjct 165 ATCGACCCTGATAAGGTAGTCCTTGAGAACGATAA 131 >seq37313 Length=829 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 73059 TACGGTGTATTTGCCGCAGGTGCAAGTGT-TCTT-CAACAAGGCCAGTTCTTCCAGGGTA 73116 || |||| ||||||||||||| |||| | |||| || || || |||||||| || || Sbjct 711 TATGGTGCATTTGCCGCAGGT--AAGTCTGTCTTACAGCAGGGACAGTTCTTTCAAGGAT 768 Query 73117 TGGATGCAACGATGACGATGGTTTCTGATTCATCCGAAGAAGCTGCAAAAAGAATCCAGT 73176 |||| || || ||| ||||||||||||||| || |||||||||| || | ||||||| Sbjct 769 TGGAGGCCACAATGTTGATGGTTTCTGATTCCTCAGAAGAAGCTGGTAAGCGTATCCAGT 828 Query 73177 T 73177 | Sbjct 829 T 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478548630348160