Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028782.1 Length=40024 Score E Sequences producing significant alignments: (Bits) Value seq2084 194 4e-45 >seq2084 Length=377 Score = 194 bits (214), Expect = 4e-45 Identities = 270/376 (72%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 6134 AGACGTTGCAACAGACTTAATGCAAACGCAAGAATGGAAAGACCAAAATACTTACGTTGA 6193 ||| || || | ||||| |||||||||||||| |||||||| ||||| || |||||| | Sbjct 1 AGATGTAGCTATGGACTTGATGCAAACGCAAGAGTGGAAAGATCAAAACACCTACGTTAA 60 Query 6194 TACTAAAAACCGTCAAGAAGGTATTTTAGGTAAAATGTACGGCATCTATTTCTTAGAAGC 6253 ||| | ||||| || | ||||| | ||||| |||||||| ||||| ||| ||| | Sbjct 61 AACTGAGAACCGCGAAAACGGTATGCTCGGTAAGATGTACGGAATCTACTTCAAAGAGGT 120 Query 6254 TGACAACGCTATGAAATGGGCGGGCGCTGGTGCTTCATCTGCTGACGTATTCGGCACGCT 6313 ||| | | | |||| ||| ||||||||| | | |||||||||| ||| || | Sbjct 121 GGACGAAGGAGTTAAATTCCTGGGTGCTGGTGCTGCTGCAGCTGACGTATACGGAACAAT 180 Query 6314 ATTTATTGGTAAGGGCGCTTATGGTGTACCTGACGTAGCGGGCAGCTCTAAGCCTGAAAT 6373 || ||||| |||||||||||| | |||||| | | || ||| ||||| || || Sbjct 181 CTTCCTTGGTCGCGGCGCTTATGGTCTTCCTGACATCGGTGGTAGCATGAAGCCAGATAT 240 Query 6374 GATTGTACACAAAGCAGGAAGCGGC-GGTACTAATGACCCGCTTAACATGTTCAACACTG 6432 || || ||| || || | |||| || | |||||| | || ||||||||||| Sbjct 241 CATCGTTCACCCTGCTGG-ATCGGCTGGATCGGCTGACCCATTGAATCAGTTCAACACTG 299 Query 6433 TAGCGTGGAAATGTGCTCTTACTGTAGCTCGTTTACAGGAACTTGCTATGGTTCGCCTAG 6492 |||| |||||||||||| | || || | |||| | || ||||| || || ||||| | Sbjct 300 TAGCATGGAAATGTGCTTTCACCGTTGTTCGTCTGCAAGAACTCGCAATCGTTCGTTATG 359 Query 6493 AAACTGGCGCAACAGT 6508 || |||| ||| |||| Sbjct 360 AATCTGGAGCATCAGT 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127837003623216