Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq62865 149 1e-31 >seq62865 Length=363 Score = 149 bits (164), Expect = 1e-31 Identities = 216/301 (72%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 24735 ATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGG 24794 ||| | ||||| |||| |||| ||||||||||| ||||||||||||||| | || | Sbjct 355 ATTCCCAAATATAGCTGATAAGCGTGATTTTCTGGCTTGCCACAATATTCCGTACCCCTA 296 Query 24795 TCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATC 24853 ||||||| |||||||| | || || | ||| ||||| |||| | ||| |||| Sbjct 295 TCAGTTAGAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATC 237 Query 24854 ATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCAC 24913 ||| || | ||| ||||| | ||||| || | || |||||||| | | || | Sbjct 236 ATTGAGAAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAA- 178 Query 24914 TTTACTG---TAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTT 24970 | ||| ||||| |||| ||| || || |||||||| || || | ||||||| || Sbjct 177 --TCCTGGAATAAGTGTCAACAAAAGTCTGCTGATAAATTCGCCCTATACCTTTGATATT 120 Query 24971 GCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACC 25030 ||||||||| | |||||||| || || | ||| || || ||| ||| ||||||||||| Sbjct 119 GCCCACATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACC 60 Query 25031 A 25031 | Sbjct 59 A 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114217595944656