Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028926.1 Length=40000 Score E Sequences producing significant alignments: (Bits) Value seq2084 185 2e-42 >seq2084 Length=377 Score = 185 bits (204), Expect = 2e-42 Identities = 268/376 (71%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 6171 AGACGTTGCAACAGATTTAATGCAAACGCAAGAATGGAAAGACCAAAATACTTACGTTGA 6230 ||| || || | || || |||||||||||||| |||||||| ||||| || |||||| | Sbjct 1 AGATGTAGCTATGGACTTGATGCAAACGCAAGAGTGGAAAGATCAAAACACCTACGTTAA 60 Query 6231 TACTAAAAACCGTCAAGAAGGTATTTTAGGTAAAATGTACGGCATCTATTTCTTAGAAGC 6290 ||| | ||||| || | ||||| | ||||| |||||||| ||||| ||| ||| | Sbjct 61 AACTGAGAACCGCGAAAACGGTATGCTCGGTAAGATGTACGGAATCTACTTCAAAGAGGT 120 Query 6291 TGACAACGCTATGAAATGGGCGGGCGCTGGTGCTTCATCTGCTGACGTATTCGGCACGCT 6350 ||| | | | |||| ||| ||||||||| | | |||||||||| ||| || | Sbjct 121 GGACGAAGGAGTTAAATTCCTGGGTGCTGGTGCTGCTGCAGCTGACGTATACGGAACAAT 180 Query 6351 ATTTATTGGTAAGGGCGCTTATGGTGTACCTGACGTAGCGGGCAGCTCTAAGCCTGAAAT 6410 || ||||| |||||||||||| | |||||| | | || ||| ||||| || || Sbjct 181 CTTCCTTGGTCGCGGCGCTTATGGTCTTCCTGACATCGGTGGTAGCATGAAGCCAGATAT 240 Query 6411 GATTGTACACAAAGCAGGAAGCGGC-GGTACTAACGACCCGCTTAATATGTTTAACACTG 6469 || || ||| || || | |||| || | ||||| | ||| ||| ||||||| Sbjct 241 CATCGTTCACCCTGCTGG-ATCGGCTGGATCGGCTGACCCATTGAATCAGTTCAACACTG 299 Query 6470 TAGCGTGGAAATGTGCTCTTACTGTAGCTCGTTTACAGGAACTTGCTATGGTTCGCCTAG 6529 |||| |||||||||||| | || || | |||| | || ||||| || || ||||| | Sbjct 300 TAGCATGGAAATGTGCTTTCACCGTTGTTCGTCTGCAAGAACTCGCAATCGTTCGTTATG 359 Query 6530 AAACTGGCGCAACAGT 6545 || |||| ||| |||| Sbjct 360 AATCTGGAGCATCAGT 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127760274565872