Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq62865 147 7e-31 >seq62865 Length=363 Score = 147 bits (162), Expect = 7e-31 Identities = 212/295 (72%), Gaps = 8/295 (3%) Strand=Plus/Minus Query 41008 AAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTT 41067 ||||| |||| |||| ||||||||||| ||||||||||||||| | || | |||||| Sbjct 349 AAATATAGCTGATAAGCGTGATTTTCTGGCTTGCCACAATATTCCGTACCCCTATCAGTT 290 Query 41068 AATATGCGTAACATCGGTAAACCTTGGCTT-TCAAAGTATGGTAACACTTTATCATTCAG 41126 | |||||||| | || || | ||| ||||| |||| | ||| ||||||| || Sbjct 289 AGAATGCGTAATAATGG-AATTTTCTGCTCATCAAAAAATGGAATAACTCTATCATTGAG 231 Query 41127 CATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACT 41186 | ||| ||||| | ||||| || | || |||||||| | | || | | || Sbjct 230 AAGATCTGCAGCTGTAATAGCTGTTCTGTCCGTGTAAAGTTTAACCATTGCAA---TCCT 174 Query 41187 G---TAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCAC 41243 | ||||| |||| ||| || || |||||||| || || | ||||||| |||||||| Sbjct 173 GGAATAAGTGTCAACAAAAGTCTGCTGATAAATTCGCCCTATACCTTTGATATTGCCCAC 114 Query 41244 ATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCACCA 41298 ||| | |||||||| || || | ||| || || ||| ||| |||||||||||| Sbjct 113 ATAATAGGTATCTTGAGAACCCAAATAACCTGGATGTTGCGTCTCAATTTCACCA 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166569192361656