Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq2061 327 1e-84 seq2042 158 1e-33 >seq2061 Length=505 Score = 327 bits (362), Expect = 1e-84 Identities = 341/446 (76%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 49327 AATCAGATCAACAGCATCGTAACCTTCTCCAATGAAGGCATCGTCCTGTATGGTGACAAA 49386 || ||||||||||||||||| |||||| ||| |||||||||||| |||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 49387 ACTGGCTTGACCCGCCCGTCGGCGTTTGACCGCATCAACGTTCGTGGTCTGTTCATCATG 49446 || ||| |||||||||| ||||| |||||||||||||| |||||| || |||||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 49447 GCTGAGCAGAACATCGCCGCAATCGCCAAATACTATCTTGGTGAGAACAATGACGCGTTT 49506 |||||| |||||| | || || || |||||||| || || ||||| || || |||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 49507 ACACGTGGTCTGTTCAGCAATGCGGTTCGTCCATATATTCGCCAGCTGGCAAATATGGGC 49566 || || |||||| ||| ||||| |||||| ||||||||||| ||||| Sbjct 294 ACGCGCCAGTTGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGGT 235 Query 49567 GCGATTTACGATGGTAAAGTCAAATGTGATGAAGACAACAACACTGCTGATGTCATTGCG 49626 || || ||||||||| ||||||||||| |||||||||||| | ||| || | || Sbjct 234 GCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGCC 175 Query 49627 GCAAACCAAATGGTTGCAGGCATTTGGTTGAAGCCTGAGTACAGCATTAATTGGGTCTAC 49686 || ||||||||| | ||||| || ||| |||| || || |||||||| || ||| ||||| Sbjct 174 GCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTAC 115 Query 49687 TTAGATTTTGCTGCAGTTCGACCAGATATGGAGTTCAGCGAAATCGAATCCGGTGGC--- 49743 | ||||| || || || || || || || | |||| |||| | ||| |||||| Sbjct 114 CTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAA---GGTGGCATG 58 Query 49744 GGCATCGTTGCTGCTTCATAAAAATG 49769 |||||||| || || |||||| |||| Sbjct 57 GGCATCGTGGCCGCGTCATAACAATG 32 >seq2042 Length=482 Score = 158 bits (174), Expect = 1e-33 Identities = 216/299 (72%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 51777 GAGAAACGCGCATTCTATCTCGACGTCGGTACTCTCGGCAAGAAATCTGCTGAAGAATAC 51836 ||||| ||||||||||| || |||||||||| | || |||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 51837 ATGACTATGATGATGGGTAAATTCAAAAACCGTAA--TG-CATACGACAGGACCACTGGT 51893 ||| | ||||||||||| || || || ||| || || |||| || | || || Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAAC---AACCTGTCATATAACCGTCAGACCGGC 366 Query 51894 AAAATTACAGGCAACGCCCACCTCATGGGGATTGCAGAAGATTATTGGTTGCCTCGTCGT 51953 || | |||| || | ||||||||||| || || || || || ||| |||| |||||| Sbjct 365 AAGGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGT 306 Query 51954 GAAGGCCAAAACGCCACAGAAATTGCAACTGTTGGTGGTGGGAATCAATTGGGTGAAATG 52013 || || || ||||| || ||||| || | ||||| || | || |||| ||||| Sbjct 305 GAGGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATG 246 Query 52014 GACCATGTGAATTATTTCCGTGAAAAACTCTATGATGCACTGATGATCCCCAAGAGCCG 52072 || ||||||||||| ||||| || || || | ||| || | ||| || |||||||| Sbjct 245 GATCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501249735444640