Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_029050.1 Length=51896 Score E Sequences producing significant alignments: (Bits) Value seq1998 102 3e-17 >seq1998 Length=468 Score = 102 bits (112), Expect = 3e-17 Identities = 204/291 (70%), Gaps = 21/291 (7%) Strand=Plus/Plus Query 15000 ATATCTGACAGGTAGGATGAAGTAAGCTTGCTCACAGCTTCATGGGCGTTTGCTGCATCA 15059 ||||||||| || | |||||| | || ||||||| || | |||||||| || ||||| Sbjct 158 ATATCTGAC-GGCAACATGAAGAAGGCCTGCTCAC--CTGCGTGGGCGTTAGCCGCATCC 214 Query 15060 GCCATCGTTCCATTGAACCTTTTCTGATTCTGCCCCGTAGCCATTTCGAGGTCAATCGCT 15119 |||| ||| || |||| |||| | ||||| | || | | |||| | ||| Sbjct 215 TGCATCAATCC-TTCAACCATTTCAGCTTCTGGGC--TATTCTTGTCGA------TTGCT 265 Query 15120 GCCTTGTTGAAGAT-CTGAGAAGGAATCTTGTGTTCGATGAATACCAACCATCAGGTCTT 15178 |||||||| | ||| ||| ||||||||||| | || ||| || || | ||||| | Sbjct 266 GCCTTGTTAAGGATACTG-GAAGGAATCTTAAGCTCAATG-ATCCCGCC---GAGGTCCT 320 Query 15179 TGGAAGCACCAACCTTGTTTCAAGGTTCTCAATCAGGATTTTTTCACGGAAAGCACGATA 15238 | | || || | | ||| | ||||||||| || | ||||| |||||||| || || Sbjct 321 TAGTTGCCCCGA--TGACTTCCAAGTTCTCAATAAGAACCTTTTCTCGGAAAGCGCGGTA 378 Query 15239 CCAATCCAACCAGCGGGGATACGCCGTCAGGGTTTGACTCTGTACCACTAA 15289 ||| ||||| || || || || || ||||||||| || ||||||| || Sbjct 379 ACAA-CCAACTAGAGGTGAAACACCCATAGGGTTTGAGTCAGTACCACCAA 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165792310656048