Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6583 122 8e-23 >seq6583 Length=1017230 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || ||||||||||| | ||||||||| |||||||| || ||||| ||||||||||| Sbjct 910610 TATTCAGCCCCAAAGTGCCGCCACTGGAAACCGTAGACAGGTCCCAAATCGCCCTCCTCT 910669 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | | ||| || |||||| || |||| || || | ||||||| || | Sbjct 910670 CTATCGGTGAAGCCGTAGGAGTCCAGGAAAGCTCGCGAGCCATTTTCGTCCCAAATATGA 910729 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078 || || | || |||||||||| || || | || | | |||||||||||| ||| Sbjct 910730 ACACCTTTAGCCGTTAGCTCCTTGGAATTTGTCGATCCTTTGATGAACCACAGCAGTTCC 910789 Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||||||| | |||| |||| ||||| || ||||| || ||||| Sbjct 910790 TCGACCACCGCTCGCCAGAACACCCGTTTAGTTGTCAGTAGTGGAAA 910836 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 ||||| || ||||| || ||||| |||| |||| | ||||||||||| ||||||||| Sbjct 910836 TTTCCACTACTGACAACTAAACGGGTGTTCTGGCGAGCGGTGGTCGAGGAACTGCTGTGG 910777 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 ||| | | || | || || |||||||||| || | || || | || |||||| Sbjct 910776 TTCATCAAAGGATCGACAAATTCCAAGGAGCTAACGGCTAAAGGTGTTCATATTTGGGAC 910717 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGAC 34399 | | || || |||| || |||||| || ||| | | | ||||||||||| Sbjct 910716 GAAAATGGCTCGCGAGCTTTCCTGGACTCCTACGGCTTCACCGATAGAGAGGAGGGCGAT 910657 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 ||||| || |||||||| ||||||||| | ||||||||||| || || Sbjct 910656 TTGGGACCTGTCTACGGTTTCCAGTGGCGGCACTTTGGGGCTGAATA 910610 Score = 98.7 bits (108), Expect = 9e-16 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||||||||||||||| |||||||| | ||| || ||||| ||||||||||| | Sbjct 910213 GACATGAGCGATCATGTAGGTGAGCAGGGAGTACGACGCTATGTTAAACGGCACCCCCAG 910272 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | || || || ||||| ||||| || || || |||||||| Sbjct 910273 ACCCATGTCCGCGCTTCTCTGGTAAAGCTGCGCGGACAATTCGCCGTTATTTACGTAGAA 910332 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 || || | ||||||||| || | |||||| || | || ||| ||||| || Sbjct 910333 CTGTACGAAAGCGTGGCACGGCGGCAATGCCATCTTCGGAATGTCGGCCGGATTCCAAGC 910392 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAG 6855 | |||| | || | |||||| || || |||| | ||| ||| || | || || Sbjct 910393 GGACATTATAATACGTCTGTCCTCCGGAGAATGCTTTACCTTGTGGATAACTTCCTTCAA 910452 Query 6856 CTGGTCCGCTCC 6867 |||||| |||| Sbjct 910453 CTGGTCTACTCC 910464 Score = 98.7 bits (108), Expect = 9e-16 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 34478 GGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGG 34537 |||| |||||| || || | || ||| ||| | |||| || || |||||| | Sbjct 910464 GGAGTAGACCAGTTGAAGGAAGTTATCCACAAGGTAAAGCATTCTCCGGAGGACAGACGT 910405 Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597 || | |||| ||| ||||| ||| || | || |||||| | || ||||||||| Sbjct 910404 ATTATAATGTCCGCTTGGAATCCGGCCGACATTCCGAAGATGGCATTGCCGCCGTGCCAC 910345 Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657 | || || |||||||| || || || ||||| ||||| || || || Sbjct 910344 GCTTTCGTACAGTTCTACGTAAATAACGGCGAATTGTCCGCGCAGCTTTACCAGAGAAGC 910285 Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | |||||||| | ||||||||||| ||||| || ||| | |||||||| |||||| Sbjct 910284 GCGGACATGGGTCTGGGGGTGCCGTTTAACATAGCGTCGTACTCCCTGCTCACCTACATG 910225 Query 34718 ATCGCTCATGTC 34729 |||||||||||| Sbjct 910224 ATCGCTCATGTC 910213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447826532055360