Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6476 187 6e-42 seq34431 170 4e-37 seq34430 159 8e-34 seq8074 154 3e-32 seq6559 143 6e-29 seq61987 111 4e-19 seq7367 96.9 8e-15 >seq6476 Length=10381176 Score = 187 bits (206), Expect = 6e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||||| || || | ||| || || || |||||||||||||| ||||| | |||||| Sbjct 5657354 CGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAAAGGGTT 5657295 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || || ||||||||||||||||| ||||| || | || ||||| || || |||| |||| Sbjct 5657294 CTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGAATTCCT 5657235 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||||||||| || ||||||||||| || ||||||||| |||||| ||||| Sbjct 5657234 TCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGG 5657175 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || |||||||| || || || | ||||| Sbjct 5657174 GTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 Score = 174 bits (192), Expect = 4e-38 Identities = 171/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | || || || |||||||| |||||||||||||| | ||| ||| Sbjct 5657126 CGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTC 5657067 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||| || |||||||| || || || || || || || || || |||| ||| Sbjct 5657066 CTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGAATGCCT 5657007 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| ||||| ||||| ||||||||| |||||| ||||| Sbjct 5657006 TCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAACTTCGAGG 5656947 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || |||||||| || ||||| | ||||| Sbjct 5656946 GTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||| || || ||||| || || || || |||||||| ||||| | ||| || Sbjct 5656898 CGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTT 5656839 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || ||||| || || |||||||| || ||||| | |||||||| || ||||||| ||| Sbjct 5656838 CTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCT 5656779 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || |||||||||||||| ||| || || || || |||||||| ||| |||||||| Sbjct 5656778 TCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACCTCGAGG 5656719 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| || ||||| || || || | ||||| Sbjct 5656718 GTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq34431 Length=440 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | || || || |||||||||||||||||||| || | ||| || Sbjct 423 CGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAAAGAGTT 364 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||| || |||||||| ||||| || | || ||||| || || |||| ||| Sbjct 363 CTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGAATGCCT 304 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| ||||| || || ||||||||| |||||| |||||| Sbjct 303 TCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACTTCGAGA 244 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || || |||||||| || || || | |||||| Sbjct 243 GTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 Score = 156 bits (172), Expect = 1e-32 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || |||||||| || || || ||||| ||||||||||| | ||| ||| Sbjct 195 CGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGAAAGAGTC 136 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||| || |||||||| || || || || || ||||| || || |||| ||| Sbjct 135 CTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGGAATGCCT 76 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| ||||| ||||| |||||||| |||||| ||||| Sbjct 75 TCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGATGCTTCAACTTCGAGG 16 Query 211074 GTGATCGTCTTTCC 211087 ||||| || || || Sbjct 15 GTGATGGTTTTGCC 2 >seq34430 Length=319 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || | || || || |||||||| |||||||||||||| | ||| ||| Sbjct 302 CGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTC 243 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 || |||||||| || |||||||| || || || | || || || || || |||| ||| Sbjct 242 CTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGAATGCCT 183 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| ||| ||||| || || ||||||||| |||||| ||||| Sbjct 182 TCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACTTCGAGG 123 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || |||||||| || || || | ||||| Sbjct 122 GTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq8074 Length=2046595 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| ||||| || ||||| | ||| || | ||| || |||||||| ||||| ||||||| Sbjct 637376 CTTTCTGGATATTGTAATCGGAAAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGA 637317 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | || || ||||| || || |||| ||| ||||||||||| ||||| || || || | Sbjct 637316 TGAGTCGCTGTTGATCCGGCGGAATTCCCTCCTTGTCCTGTATCTTCGCCTTGACATTCT 637257 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||||| || ||| || |||||||| ||||| ||||| |||||||| ||||| || | Sbjct 637256 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 637197 Query 211105 ACACCTGCAT 211114 | | |||||| Sbjct 637196 AGATCTGCAT 637187 >seq6559 Length=1815223 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||||| || ||||||||||| ||||||||||| || ||||| ||||| | ||| || | Sbjct 1626014 AAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCG 1625955 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 || || || ||||| || || |||||||| | | || || || ||||||| ||||| Sbjct 1625954 GCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTC 1625895 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||||| || || || |||||||||||||| |||||||| ||||| || | || Sbjct 1625894 TTTGTCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGT 1625835 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| || | || || || || | |||||| Sbjct 1625834 GATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625796 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| || || ||||| || || || | ||||| | || || || |||||| Sbjct 1624402 TGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGC 1624343 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| | || || || ||||| || | ||||||||||||||| |||||| Sbjct 1624342 TTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATTCCTTCCTTGTCCTGAATCTTT 1624283 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||||| ||||||||||| || ||||| || ||||| || ||||| || || Sbjct 1624282 GCCTTCACGTTCTCGATGGTGTCGGAAGCCTCAACTTCAAGAGTTATGGTCTTCCCAGTT 1624223 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | |||||| Sbjct 1624222 AACGTCTTCACGAATATCTGCAT 1624200 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | ||||| || || ||||| || || || ||||| || || | || || Sbjct 1625560 CGAAGTCTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTG 1625501 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||| || || |||||||| | | || || || || || | ||| Sbjct 1625500 CGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCT 1625441 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| || || ||| || |||||||| ||||| || |||||||| || Sbjct 1625440 TCCTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACCTCCAGT 1625381 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| || || | |||||| Sbjct 1625380 GTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | || | || | ||||| ||||| || ||||||||||| | || || Sbjct 1625104 CGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTG 1625045 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || || || || || ||||| | | ||| || || || || | |||| Sbjct 1625044 CGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCT 1624985 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || || || ||| || || ||||| ||||| || ||||| || | Sbjct 1624984 TCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAAC 1624925 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || | |||||| || || | ||||| Sbjct 1624924 GTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 >seq61987 Length=372 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | || | || | ||||| ||||| || ||||||||||| | || || Sbjct 68 CGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTG 127 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || || || || || ||||| | | ||| || || || || | |||| Sbjct 128 CGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCT 187 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||| || || ||| || || ||||| |||||||| ||||| || | Sbjct 188 TCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCAACTTCCAAC 247 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || | || || || || | |||||| Sbjct 248 GTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 >seq7367 Length=54923 Score = 96.9 bits (106), Expect = 8e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||| ||||| |||||||||||||||| || ||||| |||||||||| || Sbjct 20333 GTGTAAAGTGGATTCTTTCTGGATGTTATAATCCGACAGAGTCCTGCCATCTTCCAATTG 20392 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 |||||| || || || | | |||||| ||||| |||| |||| Sbjct 20393 CTTGCCAGCAAAAATCAATCTTTGTTGATCAGGCGGAATTCCT 20435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157996721016620