Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8374 145 7e-30 >seq8374 Length=807232 Score = 145 bits (160), Expect = 7e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || || | |||||| |||||||| ||||||||||| ||||| || Sbjct 791820 AATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGGATATTTTCTATGGCAATTTG 791761 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 ||| ||||| || || | ||||| || | || ||||| | || |||||||| | ||| Sbjct 791760 AAAGCCGTAGAAACAACGTGCTTCAGTGATTTTCACTTCCTGACTGAATCTTTCAATTAA 791701 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 ||||| || || ||||||||| || || ||||| ||||| |||||||| ||||| || Sbjct 791700 ATTTTCATTAACAATACCGTCAGAAGCGGCGAAAAATGCCAAGACATGAGAGATAAAATA 791641 Query 4997 CTGTTCGTCAGGCTTAAGTTTTT 5019 | ||||||| || || |||| Sbjct 791640 TTTCTCGTCAGAATTTAGCTTTT 791618 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 5049 ACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGA 5108 |||||||| | ||||||||| || ||| | ||||||||||||||| ||| || |||||| Sbjct 791414 ACTTCTTCTATAGTCCAAAAGGAGGCTACAGCTTTTTTGTACATATCCCAGATGTCAGGA 791355 Query 5109 TACTGAATCGGAAGTATGACAAA 5131 |||||||| || | || ||||| Sbjct 791354 TACTGAATAGGGAACATTACAAA 791332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426644739363404