Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6583 107 1e-18 >seq6583 Length=1017230 Score = 107 bits (118), Expect = 1e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| || || || || |||| ||| ||||| ||||| || ||||||| || Sbjct 910600 CATGTCTTTGTATTCAGCCCCAAAGTGCCGCCACTGGAAACCGTAGACAGGTCCCAAATC 910659 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||||| || || | |||||| ||||| || ||| || || || |||| Sbjct 910660 GCCCTCCTCTCTATCGGTGAAGCCGTAGGAGTCCAGGAAAGCTCGCGAGCCATTTTCGTC 910719 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 ||| || | || || || | | ||||| ||||| ||||| || ||| ||| |||||| Sbjct 910720 CCAAATATGAACACCTTTAGCCGTTAGCTCCTTGGAATTTGTCGATCCTTTGATGAACCA 910779 Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 |||||| ||||| || || || ||| || |||| || || || || || ||||| Sbjct 910780 CAGCAGTTCCTCGACCACCGCTCGCCAGAACACCCGTTTAGTTGTCAGTAGTGGAAA 910836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270 |||||||| ||||| |||||||| ||||| || ||||| || |||||||| || ||| Sbjct 910208 CCGGTGACATGAGCGATCATGTAGGTGAGCAGGGAGTACGACGCTATGTTAAACGGCACC 910267 Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACG 27330 || || ||||||||| | |||||||| ||||| || | || || | ||||| Sbjct 910268 CCCAGACCCATGTCCGCGCTTCTCTGGTAAAGCTGCGCGGACAATTCGCCGTTATTTACG 910327 Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 || ||||| | ||||||||||| || | ||||| Sbjct 910328 TAGAACTGTACGAAAGCGTGGCACGGCGGCAATGCCAT 910365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369156891932228