Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8374 109 8e-19 seq6487 87.8 3e-12 >seq8374 Length=807232 Score = 109 bits (120), Expect = 8e-19 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972 ||||| |||||| || ||||| || ||||| || || || ||||| ||||| ||||| | Sbjct 791801 AAAGA--ATACATCTCAGAATGGATATTTTCTATGGCAATTTGAAAGCCGTAGAAACAAC 791744 Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTC 47032 ||||||||| || | || || || |||| |||| ||||| ||||| || || | Sbjct 791743 GTGCTTCAGTGATTTTCACTTCCTGACTGAATCTTTCAATTAAATTTTCATTAACAATAC 791684 Query 47033 CATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC 47084 | ||| ||| || ||||||||||| ||||| ||||||||||| || || Sbjct 791683 CGTCAGAAGCGGCGAAAAATGCCAAGACATGAGAGATAAAATATTTCTCGTC 791632 >seq6487 Length=3923646 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 77348 TTTTTTGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 || || |||||||||||||| || || ||| | ||||| |||||||| || ||||||||| Sbjct 1177012 TTCTTGGTTTCCTTGTGTAGGTTAGACACGTCGATTCTTGCAGCTAGTATAGCATAGTCA 1177071 Query 77408 GGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTA 77467 ||||| | ||| | || ||||| |||| ||||||| | |||| | | | ||| Sbjct 1177072 GGATGATTTGTCGCCATCGTAGCTGCAGTTTCAGCCGCTAGATTATCCAGTATAACTGTA 1177131 Query 77468 GTAACTCC 77475 || ||||| Sbjct 1177132 GTTACTCC 1177139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712241178236160