Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq37339 114 3e-21 seq42081 102 2e-17 >seq37339 Length=736 Score = 114 bits (126), Expect = 3e-21 Identities = 184/262 (70%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 9794 CTTTGCCGGTGGCGAAAT-TGGCCCGTCGCTGTACGGGCGTATCGACATGGCGAAATACC 9852 |||||| ||||||||| | | ||| | || ||||| ||| | ||| ||| |||||||| Sbjct 16 CTTTGCTGGTGGCGAAGTATCGCCAAGC-CTTTACGGCCGTGTTGACCTGGAGAAATACC 74 Query 9853 AGGTGGCATTGCGCAAATGCGATAACTTTATCGTGCGTCAGTATGGCGGCGTGGAGAATC 9912 || | |||| ||| |||||| || || || || ||||| ||||| ||||| | Sbjct 75 AGACCTCTCTGCGACGTTGCCGTAACTTCATTGTCCGCCAATATGGTGGCGTAGAGAACC 134 Query 9913 GCCCGGGGACGCGTTTTGTCGGTGCCGCAAAATATGCTAACCGCAAATGCCGACTGATCC 9972 | || ||||| || | ||| | | ||||| | | | | ||||| || || ||||||| Sbjct 135 GTCCCGGGACACGGTATGTAGCGCCGGCAAAGTTTCCCGATCGCAAGTGTCGCCTGATCC 194 Query 9973 CGTTCCAGTTCTCTACTGTTCAGACCTATGCGCTGGAGTTCGGTCACCAGTACATGCGCG 10032 ||||||||||| |||| || ||||||| ||| || | || |||| || | |||| Sbjct 195 CGTTCCAGTTCAACACTGAGCAAACCTATGTGCTCGAAGTTGGAGACCACTATTTCCGCG 254 Query 10033 TTATCAAAGATGGCGCGCTGGT 10054 | | | ||||| || | ||| Sbjct 255 TGTTTATGGATGGAGCTCAGGT 276 >seq42081 Length=911 Score = 102 bits (112), Expect = 2e-17 Identities = 117/155 (75%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 14055 AATCCGTGGGTAGGCCAGACTGGTGATGATGGGCGCTTTGCCAAATTTGAAACGCCAGAG 14114 ||||| |||| |||||| || ||| ||| || |||||||||||||| || || || ||| Sbjct 258 AATCCATGGGAAGGCCAAACGGGTAGTGACGGTCGCTTTGCCAAATTCGAGACTCCTGAG 199 Query 14115 CATGGCATTCGTGCGCTGGGCCGCAACCTGATGTCATAC--CAG-CGTCAGGGTATTGAT 14171 ||||| ||||| ||| | ||| |||||| |||||||| ||| | || || | ||| Sbjct 198 CATGGAATTCGCGCGTTAGGCAAGAACCTGCTGTCATACAACAGACTGCATGGGCTGGAT 139 Query 14172 ACCGTCAGCGAGATCATTAATCGCTGGGCACCGCC 14206 || || | ||||| |||| ||| ||||| || || Sbjct 138 ACTGTTGGGGAGATAATTACTCGATGGGCTCCCCC 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133387072104432