Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_031128.1 Length=158081 Score E Sequences producing significant alignments: (Bits) Value seq2061 342 5e-89 seq2042 159 3e-34 >seq2061 Length=505 Score = 342 bits (378), Expect = 5e-89 Identities = 341/441 (77%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 71956 TTATGAAGCAGCAACGATGCC---GCCACCGGATTCGATTTCCGAGAATTCCATGTCCGG 72012 |||||| || || |||||||| |||||| ||| | ||| ||||| | |||||||| Sbjct 37 TTATGACGCGGCCACGATGCCCATGCCACC---TTCCACTTCGGAGAACGCAATGTCCGG 93 Query 72013 ACGAACGGCAGCAAAGTCAAGATACACCCAATTTATGCTGTATTCCGGTTTCAACCAAAT 72072 ||| ||||| || || || || || | ||| || ||||||||||| ||||||| ||| || Sbjct 94 ACGGACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGCCAGAT 153 Query 72073 GCCTGCAACCATTTGGTTTGCCGCAATGACATCAGCAGTGTTGTTGTCTTCATCACATTT 72132 ||||| | ||||||||| || || | || ||| | |||||||||||| |||||||| Sbjct 154 ACCTGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCACATTT 213 Query 72133 GACTTTACCATCGTAAATCGCGCCCATATTTGCCAGCTGGCGAATATATGGACGAACCGC 72192 ||| ||||||||| || || ||||| ||||||||||| |||||| ||||| Sbjct 214 GACCTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTGACCGC 273 Query 72193 ATTGCTGAACAGACCACGTGTAAACGCGTCATTGTTCTCACCAAGATAGTATTTGGCGAT 72252 ||| |||||| || |||||||| || || ||||| || || |||||||| || || Sbjct 274 GTTGGTGAACAACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTAGCAAT 333 Query 72253 TGCGGCGATGTTCTGCTCAGCCATGATGAACAGACCACGAACGTTGATGCGGTCAAACGC 72312 || | |||||| |||||||||||| || |||||| |||||||||||||| ||||| Sbjct 334 GGCAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCGAACGC 393 Query 72313 CGACGGGCGGGTCAAGCCAGTTTTGTCACCATACAGGACGATGCCTTCATTGGAGAAGGT 72372 |||||||||| ||| ||||||||||| |||| |||||||||||| ||| |||||| Sbjct 394 ACTTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTGAAGGT 453 Query 72373 TACGATGCTGTTGATCTGATT 72393 ||||||||||||||||| || Sbjct 454 AACGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 159 bits (176), Expect = 3e-34 Identities = 311/456 (68%), Gaps = 15/456 (3%) Strand=Plus/Plus Query 69496 TTTCAAAATTAACTGGCGGCGCAAGAATTCCATAAAGAAATGGGAGTAACGGCGTCGTAA 69555 ||||| || ||||| || || | | ||| |||| | ||||| ||||| || | Sbjct 33 TTTCATGATCAACTGTCGACGAAGCAGGCCCAAGAAGATGAGTGAGTACCGGCGGCGCAG 92 Query 69556 CCCAGCACAGAACTTGCTGAAGCGCAGCTCTTCCTGTGTAATCTCCGCAAGGTTAGAACC 69615 | |||||||||||| ||||||| ||| || | || | || | || | | || Sbjct 93 ACGAGCACAGAACTTCTTGAAGCGATTCTCATCACGAGTTACTTCACCGAGATCACTCCC 152 Query 69616 CCCAATGTTAATGGA------ACCTTCTTCCTGAAGACGGCTCTTGGGGATCATCAGTGC 69669 || || || ||| ||| || ||| | |||||||| || ||| | || || Sbjct 153 GCCGATATTGATGTTGCCGCCACCGTCATCC---AATCGGCTCTTAGGAATCTTGAGAGC 209 Query 69670 ATCATAGAGTTTTTCGCGGAAATAATTCACATGGTCCATTTCACCCAATTGATTCCCACC 69729 | | || || || |||||| ||||||||||| ||||||| |||| || | || || Sbjct 210 ACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCCATTTGGCCCAGCTGGTCACCGCC 269 Query 69730 ACCAACAGTTGCAATTTCTGTGGCGTTTTGGCCTTCACGACGAGGCAACCAATAATCTTC 69789 ||| | || ||||| || ||||| || || |||||||| |||| ||| || || || Sbjct 270 ACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCACGACGTGGCATCCAGTAGTCCTC 329 Query 69790 TGCAATCCCCATGAGGTGGGCGTTGCCTGTAATTTTACCAGTGGTCCTGTCGTA-GGCA- 69847 || || ||||||||||| | || |||| | || || || | || || | || Sbjct 330 AGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTGCCGGTCTGACGGTTATATGACAG 389 Query 69848 -TTACGGTTTTTGAATTTACCCATCATCATAGTCATGTATTCTTCAGCAGATTTCTTGCC 69906 || ||| || || || ||||||||||| | ||| || |||||||| |||||||| || Sbjct 390 GTT---GTTCTTAAACTTGCCCATCATCATGGCCATATACTCTTCAGCGGATTTCTTACC 446 Query 69907 GAGAGTACCGACGTCGAGATAGAATGCGCGTTTCTC 69942 | |||||||||| || ||||||||||| ||||| Sbjct 447 CAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505239452267680