Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 140 3e-28
seq102 116 4e-21
>seq19922
Length=1369
Score = 140 bits (154), Expect = 3e-28
Identities = 367/551 (67%), Gaps = 8/551 (1%)
Strand=Plus/Minus
Query 16955 AACATCAG-ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGA 17013
||||| || ||| || ||||||||||| | ||||||||| | | ||| || || || ||
Sbjct 1226 AACATAAGCACA-GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGA 1168
Query 17014 AAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCC 17073
|| || | |||||||| || || ||||| | ||| || |||| || || ||
Sbjct 1167 GAAGGTAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCC 1108
Query 17074 AGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGC-GT 17132
||||| || || ||||| | ||||| || || | || ||| | | | || |
Sbjct 1107 GCTGAAGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGC 1048
Query 17133 CTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTT 17191
||| | | || ||||| | | |||| || || || |||| | |||||||
Sbjct 1047 CTTCG--AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTT 990
Query 17192 TCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGT 17251
|| ||||| || || | | || | || | || || || || ||||||||
Sbjct 989 TCAATGGCATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGC 930
Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311
| |||||||||||| ||||| | ||||||||||| ||||| || || |||||||| ||
Sbjct 929 ACGCTGTACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGT 870
Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCG 17371
|| || | ||||| |||||| | ||| || || | ||||| || || || ||||||
Sbjct 869 GCCTCTGTGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCG 810
Query 17372 TCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA 17431
|| ||||| || || ||||| | ||| |||||| | || | ||| ||
Sbjct 809 TCAGAGGCGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAG- 751
Query 17432 ACGCG-CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGC 17490
|| | |||||| | | || ||||||| ||||||||| || |||||| || |||
Sbjct 750 TCGAGCCCAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGC 691
Query 17491 CACTGCCTTTT 17501
| |||||||
Sbjct 690 TTCGGCCTTTT 680
>seq102
Length=36553
Score = 116 bits (128), Expect = 4e-21
Identities = 201/284 (71%), Gaps = 6/284 (2%)
Strand=Plus/Plus
Query 119783 TTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTG-TCGTGGAGCCC 119841
||||| ||||||||||| || || | | || |||||||| || ||| || || | ||
Sbjct 12800 TTCATGTATCGTATCTTGCCAAAGATGTCGCGCTCCTTCCA-GCCCTGATCATGAACGCC 12858
Query 119842 CGCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTT 119901
| || | ||| | ||| || ||||| || ||||||||| |||||| | ||| ||
Sbjct 12859 ACCAACTGACCACATGCAGCCGACGTACCCATTGGGATCCCGTCCATCCAGGCTGTACTT 12918
Query 119902 ATCGTTTAAGTAG-ATACAG-ACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGT 119959
||| || | |||| || ||| || | ||||| || |||||||| |||| || ||
Sbjct 12919 ATCATTGA-GTAGTATGCAGTACTCC-AACGCCTGCTCGGGAGTCTCAGTCCACTCGAGA 12976
Query 119960 AtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGA 120019
||||| || ||||||||||| || | | |||| ||||| || || || | |||| |||
Sbjct 12977 ATTTTCTTCGCCCAGTACATGCGCAGGAATCCGTGCATCTTGCCCTCCCTGACCAGTTGC 13036
Query 120020 AGTTGTGCGGCGTTCCATAAGGGATCGTGTGTACGGGCGTGTTC 120063
| ||||| | |||||| | | |||| || |||| |||||
Sbjct 13037 AACTGTGCAGAGTTCCACAGGTCGTCGTAGGTGCGGGACTGTTC 13080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517234639195560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |