Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq102 116 4e-21 seq19922 109 6e-19 >seq102 Length=36553 Score = 116 bits (128), Expect = 4e-21 Identities = 201/284 (71%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 ||||||||||||||||| ||||| | | ||||||||||| || ||| || || | || Sbjct 12800 TTCATGTATCGTATCTTGCCAAAGATGTCGCGCTCCTTCCA-GCCCTGATCATGAACGCC 12858 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054 | |||| ||| | || || ||||| || |||||||| ||| || | |||||| Sbjct 12859 ACCAACTGACCACATGCAGCCGACGTACCCATTGGGATCCCGTCCATCCAGGCTGTACTT 12918 Query 119055 ATCGTTTAAGTAG-ATACAG-ACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGT 119112 ||| || | |||| || ||| || | ||||| || ||||||| | |||| || || Sbjct 12919 ATCATTGA-GTAGTATGCAGTACTCC-AACGCCTGCTCGGGAGTCTCAGTCCACTCGAGA 12976 Query 119113 AtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGA 119172 ||||| || ||||||||||| || | | |||||||| || ||||| | | || || Sbjct 12977 ATTTTCTTCGCCCAGTACATGCGCAGGAATCCGTGCATCTTGCCCTCCCTGACCAGTTGC 13036 Query 119173 AGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACGGGCGTGTTC 119216 | ||||| | |||||| || |||| || |||| ||||| Sbjct 13037 AACTGTGCAGAGTTCCACAGGTCGTCGTAGGTGCGGGACTGTTC 13080 >seq19922 Length=1369 Score = 109 bits (120), Expect = 6e-19 Identities = 295/444 (66%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 16193 AACATTAGACAC-GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGA 16251 ||||| || ||| || || |||||||| ||||| ||||| | | ||| || || || || Sbjct 1226 AACATAAG-CACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGA 1168 Query 16252 AAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGAC 16309 || || | || ||||| || || ||||| | |||||| |||| ||||| || | Sbjct 1167 GAAGGTAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCC 1108 Query 16310 CCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCA 16369 | ||| ||| || || || |||| ||||| || || | || || | | | || Sbjct 1107 GCTGAA--GAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCC 1050 Query 16370 TCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGT 16428 | || | || ||||| | | |||| || || || | || | | |||||| Sbjct 1049 GCCTTCG-AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGT 991 Query 16429 TTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAG 16488 ||| ||||| || || | | || | || ||| || || || || || || Sbjct 990 TTCAATGGCATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAG 931 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 | ||||||||||| ||||| | ||||| ||||| ||||| || ||||| ||||| || Sbjct 930 CACGCTGTACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACG 871 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACC 16608 ||||| | ||||| |||||| | || || || | || |||||||| || || || Sbjct 870 TGCCTCTGTGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCC 811 Query 16609 GTCACTTGCAGCAAAAAACGCCAA 16632 |||| || ||||| || ||||| Sbjct 810 GTCAGAGGCGGCAAAGAAAGCCAA 787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511107123050440