Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq47809 116 7e-22 >seq47809 Length=786 Score = 116 bits (128), Expect = 7e-22 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 10790 CTTGCGGAACGCATTGCGACGCTAATTTCGCTATACCCCGAAGACCAGCAGGAAGCTGTA 10849 || || || |||| || ||||| ||||| || ||||| ||||| |||| ||||| | Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 10850 GCCCGGACGCTCGCACTTGAGTCTGAACCAATTGTTAAATTGCTGCAGGAAAACGCCTAC 10909 ||||| || | || || || || || || || || ||| || |||| ||||| || ||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 10910 CGTGAGGTTATCTGGCGTCAGCGTGTTAATGAAGCTGCTCGCGCAGGCATGCTGGCTTAT 10969 || || | | | || ||||| || |||||||| || || | ||||||| |||| Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189 Query 10970 GCCAGAGATAGCGACCTCGATAATCTCGGGGCGAATTTCAATGTTGAGCGCCTGGTCGT 11028 ||||| | ||||||||||| | || || || || ||| | || |||||||| || Sbjct 190 GCCAGCGGCAGCGACCTCGACCAACTGGGCGCAAACTTCCAGGTGCGACGCCTGGTGGT 248 Score = 84.2 bits (92), Expect = 4e-12 Identities = 168/249 (67%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 11291 AATGCGCTGAATGCTGAGGACGTGAGGCCGGTTGCTGACCGGGTTACAGTGCAGTCAGCT 11350 || ||| |||| | ||| || | | | ||||| || || || || || || | || || Sbjct 430 AAAGCGTTGAACGATGAAGATGAGCGCCCGGTGGCCGATCGCGTCACCGTCCGCTCTGCC 489 Query 11351 CAGATTATTGACTACCAGATACGCGCAACACTTTTCGTTTATCCGGGGCCGGAAAATGAG 11410 | || || |||| | || || ||| | | | || || || || ||| || Sbjct 490 AACATCATCAGCTACAACATCGATGCCGTACTGTACCTCTACCCTGGCCCTGAAGCAGAA 549 Query 11411 CCGATTCGTGCGGCGGCTGAGGCGAAGCTCAAAGCTTATATCAGTGCACAGCACAGGTTG 11470 ||| | ||| || || || || || || ||| ||| ||||| || |||||| | || Sbjct 550 CCGGTGCGTCGCGCTGCCGAAGCCAAACTGAAAAATTACATCAGCGCCCAGCACCGTTTA 609 Query 11471 GGGCGGGATATTCGCCTGTCAGCAATTTATGCCGCGTTGCATGTTGAGGGGGTGCAACGT 11530 || || || |||||| |||| ||||| || ||||| |||||| || ||||||||||| Sbjct 610 GGCCGTGACATTCGCTTGTCGGCAATCTACGCCGCACTGCATGCCGAAGGGGTGCAACGC 669 Query 11531 GTCGAACTG 11539 || ||| || Sbjct 670 GTTGAATTG 678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97819333264044