Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_001317.1
Length=30624
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 116 7e-22
>seq47809
Length=786
Score = 116 bits (128), Expect = 7e-22
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 10790 CTTGCGGAACGCATTGCGACGCTAATTTCGCTATACCCCGAAGACCAGCAGGAAGCTGTA 10849
|| || || |||| || ||||| ||||| || ||||| ||||| |||| ||||| |
Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69
Query 10850 GCCCGGACGCTCGCACTTGAGTCTGAACCAATTGTTAAATTGCTGCAGGAAAACGCCTAC 10909
||||| || | || || || || || || || || ||| || |||| ||||| || |||
Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129
Query 10910 CGTGAGGTTATCTGGCGTCAGCGTGTTAATGAAGCTGCTCGCGCAGGCATGCTGGCTTAT 10969
|| || | | | || ||||| || |||||||| || || | ||||||| ||||
Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189
Query 10970 GCCAGAGATAGCGACCTCGATAATCTCGGGGCGAATTTCAATGTTGAGCGCCTGGTCGT 11028
||||| | ||||||||||| | || || || || ||| | || |||||||| ||
Sbjct 190 GCCAGCGGCAGCGACCTCGACCAACTGGGCGCAAACTTCCAGGTGCGACGCCTGGTGGT 248
Score = 84.2 bits (92), Expect = 4e-12
Identities = 168/249 (67%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 11291 AATGCGCTGAATGCTGAGGACGTGAGGCCGGTTGCTGACCGGGTTACAGTGCAGTCAGCT 11350
|| ||| |||| | ||| || | | | ||||| || || || || || || | || ||
Sbjct 430 AAAGCGTTGAACGATGAAGATGAGCGCCCGGTGGCCGATCGCGTCACCGTCCGCTCTGCC 489
Query 11351 CAGATTATTGACTACCAGATACGCGCAACACTTTTCGTTTATCCGGGGCCGGAAAATGAG 11410
| || || |||| | || || ||| | | | || || || || ||| ||
Sbjct 490 AACATCATCAGCTACAACATCGATGCCGTACTGTACCTCTACCCTGGCCCTGAAGCAGAA 549
Query 11411 CCGATTCGTGCGGCGGCTGAGGCGAAGCTCAAAGCTTATATCAGTGCACAGCACAGGTTG 11470
||| | ||| || || || || || || ||| ||| ||||| || |||||| | ||
Sbjct 550 CCGGTGCGTCGCGCTGCCGAAGCCAAACTGAAAAATTACATCAGCGCCCAGCACCGTTTA 609
Query 11471 GGGCGGGATATTCGCCTGTCAGCAATTTATGCCGCGTTGCATGTTGAGGGGGTGCAACGT 11530
|| || || |||||| |||| ||||| || ||||| |||||| || |||||||||||
Sbjct 610 GGCCGTGACATTCGCTTGTCGGCAATCTACGCCGCACTGCATGCCGAAGGGGTGCAACGC 669
Query 11531 GTCGAACTG 11539
|| ||| ||
Sbjct 670 GTTGAATTG 678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97819333264044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |