Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 473 1e-128
seq19922 161 1e-34
>seq2144
Length=13752
Score = 473 bits (524), Expect = 1e-128
Identities = 1246/1887 (66%), Gaps = 36/1887 (2%)
Strand=Plus/Minus
Query 52795 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 52854
|| ||| || | || || ||||| | | || ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 52855 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACT 52914
||| ||||| ||||| |||| | | ||||| || ||| || || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 52915 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 52974
|| || |||| ||| ||||| | |||||||||||||| ||||| ||||| | |||||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 52975 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA---CTCGCTT 53031
|||||||| || | | |||| | |||||||||| || ||||| | | |||
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC-- 4698
Query 53032 AATATCTTCTGGAAGGTTT---GTATTCTGAATAGATCCACCATCTACCATAATCCTATT 53088
| || || |||| |||| | || || || || |||| | | | || || |||
Sbjct 4697 -ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATT 4639
Query 53089 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 53148
|| || ||||||| ||| || | ||||||| | | | | | ||| |||| ||
Sbjct 4638 TTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCAC 4579
Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208
|| ||||| |||||||||| |||| | ||||| || || || || ||||| |
Sbjct 4578 AACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAA 4519
Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268
||| |||||||| |||| || || || || ||||| || ||||| ||||| | | |
Sbjct 4518 AGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAG 4459
Query 53269 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTT--CCCAATTCCAAAGA 53326
| ||| | | |||| | || || || || || ||| || |||| | ||| |||
Sbjct 4458 AGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTT--GAGTTTCGCCCAGTCCCAGAGA 4401
Query 53327 TCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCC 53385
| | ||||| || |||||||| || || | | || |||
Sbjct 4400 TTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGAC-TTCC 4342
Query 53386 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 53445
|||| || || || | || || |||||||| || ||||| || || || ||||| ||
Sbjct 4341 CTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCC 4282
Query 53446 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG 53505
|| |||||||||||||| |||| | ||| ||| || | || ||| | ||
Sbjct 4281 ATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG 4222
Query 53506 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 53565
||| | | ||| || || ||||| | ||||||||| ||||| || || || | |||
Sbjct 4221 ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATG 4162
Query 53566 TCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 53623
||| | | | | |||||| ||| || || | ||| || ||||| ||||| || || ||
Sbjct 4161 TCT-TAAGTTG-GATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTG 4104
Query 53624 TTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTG 53679
|| | |||| || || | ||| || || || || || | ||| || | ||
Sbjct 4103 TTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTC 4044
Query 53680 TCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATT 53739
||| | |||| ||||| || | || || ||||||| ||| ||||| || | |||||
Sbjct 4043 TCC-GGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATC 3985
Query 53740 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 53799
| | | ||| | | || |||||||| | ||||| || || || || || | |||
Sbjct 3984 TGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATT 3925
Query 53800 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTC 53859
|||||| || ||||| |||||||| |||||| | || ||| | || || ||||| ||
Sbjct 3924 TTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTC 3865
Query 53860 AATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA-GATTTGTATC 53918
| || || || || || || ||| | | ||||||| || | | |||||| |
Sbjct 3864 CACTTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTG---C 3808
Query 53919 TCTTTTCTC--TTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTC 53976
|| ||| | |||||| |||||| | ||||||| || |||||||||| |
Sbjct 3807 TCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGC 3748
Query 53977 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036
| ||| ||||| | | ||| ||||||| ||||| || | | | | ||| || ||
Sbjct 3747 GAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTT 3688
Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGT 54095
|||||| | ||| || ||||| || || ||| || ||||| | | | ||||||||| |
Sbjct 3687 CATAAACAAATCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTT 3629
Query 54096 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 54155
| || || ||||| |||||||| | |||| | | | ||| |||||||| || || | ||
Sbjct 3628 TGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGT 3569
Query 54156 ATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215
| |||| | | ||||||| | |||| || |||||||| | || | || || |
Sbjct 3568 AAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGT 3509
Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275
|| | ||||||| ||| |||| | |||||||||| ||||||||| || || |
Sbjct 3508 TAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAG 3449
Query 54276 TTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333
|||| |||| ||||| | | | ||| ||||| || || ||||| || |||||
Sbjct 3448 TTCCCTTGGCCCGAATGCAATGCACATT--CAGACCAATACCACCTGCTGACTTTGAGAT 3391
Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393
| || || | | | | | | |||| ||||| || ||| | |||| | ||
Sbjct 3390 CATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAG 3331
Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453
||||| || ||||| || | || | ||| | || || | || || || ||
Sbjct 3330 GAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGC 3271
Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
|| || || | ||| ||||| | |||||| ||||| | || || || |||||
Sbjct 3270 ATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATC 3211
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
| ||| || || | || || ||||| | ||||||||| || | |||| | | |||
Sbjct 3210 TCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCC 3151
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
|| ||||| | ||| || ||| |||||||| || || |||||||| || || |||
Sbjct 3150 ATTGATTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAA 3091
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTT 54660
|| || ||||| ||||| | |||||
Sbjct 3090 ATCACGATCGTATATAATGGCAGAGTT 3064
>seq19922
Length=1369
Score = 161 bits (178), Expect = 1e-34
Identities = 358/535 (67%), Gaps = 3/535 (1%)
Strand=Plus/Minus
Query 24138 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 24197
|| |||||||| || || |||||||| | || | || || || || || || |||
Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155
Query 24198 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 24257
||||| || |||||||| || ||||| || || |||||||| || ||||| ||
Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATG 1095
Query 24258 CCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC-GCTGTCATGTA--TC 24314
||||| || || ||||||||||| | | || ||| | || || || | | ||
Sbjct 1094 CCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAGATC 1035
Query 24315 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 24374
|| |||||||||| ||||| || ||| ||||| || || || ||||| |||
Sbjct 1034 CAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAG 975
Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434
|| |||| | || ||| || || || || || | | || |||||||||
Sbjct 974 AGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCC 915
Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494
|| || | || || ||||| || || || || || || || | ||||| || || ||
Sbjct 914 GAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTGC 855
Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554
||||| | || || || | | ||| ||||| || || |||||| ||| |||||
Sbjct 854 ACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAAG 795
Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 24614
|| ||||| |||||| || || | || | ||||||| | ||| || |
Sbjct 794 AAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGTC 735
Query 24615 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
|| || || |||| ||||||||| ||||| ||||| ||||| || || |||||||
Sbjct 734 ATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593364869798160
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