Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_001895.1
Length=33593
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 163 6e-36
>seq47809
Length=786
Score = 163 bits (180), Expect = 6e-36
Identities = 156/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 11361 CTCGCTGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGATCAGCAGGAGGCGGTC 11420
|| || || |||||||| || ||||||||||||||||||||||| |||| || || ||
Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69
Query 11421 GCCCGTACCCTGACACTGGAATCTGAGCCTCTCGTCAAACTGCTGGAAGAAAATGCTTAT 11480
||||| || || | |||||||| ||||| ||||||||||| || |||||||||||||
Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129
Query 11481 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCCGCACGGGCGGTGATGCTGGCCTGT 11540
|| || || | | || ||||| |||||||| |||||| ||| |||||||||| | |
Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189
Query 11541 GCCGCCGGTAATGACCTTGA 11560
||| ||| | ||||| ||
Sbjct 190 GCCAGCGGCAGCGACCTCGA 209
Score = 100 bits (110), Expect = 6e-17
Identities = 171/247 (69%), Gaps = 6/247 (2%)
Strand=Plus/Plus
Query 11889 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 11948
||||||||||| ||||| ||||| | |||||| |||| | ||| | || | |||
Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516
Query 11949 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG---CGCTGCCGCTGTGAAA 12005
|| ||||| |||||||| || ||| ||||| | || |||||||| | |||
Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGCGCTGCCGAAGCCAAA 576
Query 12006 AAGCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCC 12065
||| || || |||| || |||||||| | || || ||||| || |||| ||
Sbjct 577 ---CTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCA 633
Query 12066 ATTTATGCCGCTTTGCATGTGGAAGGTGTGCAGCGTGTCGAACTGGCTGCACCACTGGCC 12125
|| || ||||| |||||| ||||| ||||| || || ||| || | || | ||||
Sbjct 634 ATCTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCC 693
Query 12126 GACATCG 12132
|||||||
Sbjct 694 GACATCG 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107314710248970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |