Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_001895.1 Length=33593 Score E Sequences producing significant alignments: (Bits) Value seq47809 163 6e-36 >seq47809 Length=786 Score = 163 bits (180), Expect = 6e-36 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 11361 CTCGCTGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGATCAGCAGGAGGCGGTC 11420 || || || |||||||| || ||||||||||||||||||||||| |||| || || || Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 11421 GCCCGTACCCTGACACTGGAATCTGAGCCTCTCGTCAAACTGCTGGAAGAAAATGCTTAT 11480 ||||| || || | |||||||| ||||| ||||||||||| || ||||||||||||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 11481 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCCGCACGGGCGGTGATGCTGGCCTGT 11540 || || || | | || ||||| |||||||| |||||| ||| |||||||||| | | Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189 Query 11541 GCCGCCGGTAATGACCTTGA 11560 ||| ||| | ||||| || Sbjct 190 GCCAGCGGCAGCGACCTCGA 209 Score = 100 bits (110), Expect = 6e-17 Identities = 171/247 (69%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 11889 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 11948 ||||||||||| ||||| ||||| | |||||| |||| | ||| | || | ||| Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516 Query 11949 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG---CGCTGCCGCTGTGAAA 12005 || ||||| |||||||| || ||| ||||| | || |||||||| | ||| Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGCGCTGCCGAAGCCAAA 576 Query 12006 AAGCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCC 12065 ||| || || |||| || |||||||| | || || ||||| || |||| || Sbjct 577 ---CTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCA 633 Query 12066 ATTTATGCCGCTTTGCATGTGGAAGGTGTGCAGCGTGTCGAACTGGCTGCACCACTGGCC 12125 || || ||||| |||||| ||||| ||||| || || ||| || | || | |||| Sbjct 634 ATCTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCC 693 Query 12126 GACATCG 12132 ||||||| Sbjct 694 GACATCG 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107314710248970