Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 325 4e-84
seq42801 224 1e-53
seq2274 109 6e-19
seq355 105 7e-18
>seq19922
Length=1369
Score = 325 bits (360), Expect = 4e-84
Identities = 462/647 (71%), Gaps = 2/647 (0%)
Strand=Plus/Plus
Query 116652 AAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCG 116711
|||||||||| || || ||||||||||| ||||| ||||| || |||||||||| || ||
Sbjct 680 AAAAGGCCGAAGCTTCATTCTGGACCGTGGAGGAAGTGGATCTATCCAAGGACATGACCG 739
Query 116712 ACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCG 116771
|||||| || | | ||||| ||||| || ||||| || || |||| || || |
Sbjct 740 ACTGGGCTCGACTAACAGACAATGAGCGTCACTTCATTTCACATGTTTTGGCTTTCTTTG 799
Query 116772 CCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGG 116831
||||| |||||||| || || |||||||| |||||||| ||| ||||| |||||
Sbjct 800 CCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAAGTGCAAA 859
Query 116832 TGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAA 116891
| | ||||| || ||||| || ||||| ||||| ||||||||||| || ||||||||||
Sbjct 860 TCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAAA 919
Query 116892 TGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGA 116951
|||| ||||||||||| ||| | || | || | || | | || |
Sbjct 920 TGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATCAGCGCGACTACCTCTTCA 979
Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011
| ||||| || |||||||| || || ||||| || ||||| ||| ||||||
Sbjct 980 ATGCCATTGAAACGATGCCCGCTGTGAAGCGTAAGGCAGATTGGGCTCTGTCTTGGATCT 1039
Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071
|| | | ||| ||| ||||||||| | | ||||| || || ||||| ||| |||
Sbjct 1040 CCTCGAAGGCGGCAAACTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTCGAAGGCATCT 1099
Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131
|||| |||||||| || | || || ||||| ||||| || || || |||||||| |
Sbjct 1100 TCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTC 1159
Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGT- 117190
| || ||| || ||||| |||||| | |||||||| || |||||||| |||| ||||
Sbjct 1160 TTACCTTCTCGAATGAGCTGATCTCCCGCGACGAGGGACTTCATTGCGATTTTG-CTGTG 1218
Query 117191 TTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACC 117250
| ||||| |||| ||||| ||||| || || | |||| ||| |||||| || |
Sbjct 1219 CTTATGTTCCAGCACTTGGTACAGCGTCCCAGTCGTGAGCGCATCATCGAGATCATCTCG 1278
Query 117251 GACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGT 117297
|| || || || |||||| ||||| || || || || || ||
Sbjct 1279 GATGCTGTGAAGATAGAGCAGGAATTCCTTACAGACGCTCTACCAGT 1325
>seq42801
Length=1186
Score = 224 bits (248), Expect = 1e-53
Identities = 520/786 (66%), Gaps = 21/786 (3%)
Strand=Plus/Minus
Query 64831 CAGGCCGGCGTGCATGGCGTTCAGCAGGTCGCCGTTGTCGGCGTCGATCTCCCACGCGAA 64890
||||| ||||| |||| ||| || | ||||||||||| |||||||||||||| | |||
Sbjct 787 CAGGCTGGCGTTCATGCTGTTGAGAATATCGCCGTTGTCCGCGTCGATCTCCCAGGAGAA 728
Query 64891 CAGACCGCCCAGCCCGAGCTCGCGCGCGTACTTTCCCTTGTCGAGTATCGATTCGGCGCT 64950
|| ||||||||| || | ||||||| || ||| | | ||| |||
Sbjct 727 TAGGCCGCCCAGCTGCTTATCCAACACGTACTTGCCTTTGGCCTGCCCCGAGCGGGCATC 668
Query 64951 GTCGAAGGACACCAGCGCGCCCGCCGTCTCGTCGAAAGCGTACGCGCCTTTGGCCGTCGA 65010
||| |||| | ||| |||| | || | ||| |||| | ||| ||||| |
Sbjct 667 GTCAAAGGTGATCAGATCGCCGGTGGTAGGTTTGAACACGTAAGGCGCTTCCGCCGTGGC 608
Query 65011 GTCGTACGCGTAGGCGTAGCGGCCGCCGTCGA--TGGCGGCGCGCAGCTCGCGGTAGTCG 65068
|||||| | ||| | ||||| || |||| | ||| | || |||||||||
Sbjct 607 GTCGTAGGTGTACTGCCACTCGCCGCTCATGAACTGGCTG-GCG-ATCTGGCGGTAGTCC 550
Query 65069 ACCACGCCGTCCTCCCACGTGCCCGGCACNNNNNNNNNNNNNNNNNNNNNGAACGGGTTG 65128
|| | ||||| |||||| ||||| || |||||| ||
Sbjct 549 ACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTGCCGGTGAACGGAATG 490
Query 65129 CCGTCCGCGTAGCCGGTCACGCCGGTCCAGCCGCGCCCGTACATGGCCACGCCGAGCACG 65188
|| | ||||||| |||| |||||||| ||||| || |||||||| ||||| |||
Sbjct 489 TTGTTCTGGTAGCCGTTCACCCCGGTCCAACCGCGGCCATACATGGCGGTGCCGACGACG 430
Query 65189 ATCTTGTC-GGCGGGCGCGCCCTGCGCCAACAGCCGGCGCAC-CGCGCCGT---CGGCGG 65243
|||||| | ||| | |||||||||||| |||| ||| | |||||| | | ||
Sbjct 429 ATCTTGCCCGGCTTGA-CGCCCTGCGCCAGCAGC----GCATTCACGCCGTTCACCGTGG 375
Query 65244 TGTAGGGCTCGTCGGGCCGCCACGACGGCGCGTACAGCGCGGTCTGGTGGCCCAGCTCGG 65303
|||||| ||| || || | |||||| | |||||||||||| || ||||| |
Sbjct 374 TGTAGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGATGCCCCAGGTTTT 315
Query 65304 T--GGTGGACCACGCCCCCTTGAAGTCGTAGCTCATCAAAAAGATGCGGTCGAGCGAGCG 65361
| | | || | || || | ||||||||||||||||| |||||| | | | ||||
Sbjct 314 TCAGATCGA--AGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATCGAGAT 257
Query 65362 GTGCGCGCGCCCGTAGTCCACGACGGCGATCTTGTCGTCGCCGGCGCCGATGGCGCTGGT 65421
|||||| ||| |||| | |||||||||| | |||||||| ||||||| |||
Sbjct 256 CTGCGCGACGTTGTATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATGGCGGAGGT 197
Query 65422 CAGCTCGTACGTCCTGTTGGTCTCGGCCTGCAGCTCGTCGAGCATGAGCNNNNNNNNNNN 65481
|||||| ||| | | | ||| || ||| ||||| || ||||| |
Sbjct 196 CAGCTCATACTTGCGGCCGGTTTCCGCCGACAGCTGATCCAGCATCGCCCGCAGTTCTTT 137
Query 65482 NNNNNNNNNCGCGTACGTTTCGCGGTCGCGCTCCGCGTCGCCCAGCAGCGGGTTGGCGCC 65541
| | || ||||| | ||| || | | |||||| ||||||||||||
Sbjct 136 CATCAGCAGCACATAAGTTTCCCCGTC---CTGAGGGCTGCCCAGATTCGGGTTGGCGCC 80
Query 65542 CTTGCCGCCCGGAAACTCCCAGTCCACGTCCAGGCCGTCGAACAGCTTCCACGTCTGCAG 65601
||||||||||| || |||||||| | |||| ||||||||| | |||||| ||||||||
Sbjct 79 TTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAGGTCTGCAG 20
Query 65602 AAACTC 65607
|||||
Sbjct 19 GAACTC 14
>seq2274
Length=37031
Score = 109 bits (120), Expect = 6e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| || || | || ||||| ||||||||| | || || || |||
Sbjct 30156 AAAATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGA-GCC 30214
Query 40747 ACC-GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | || | | | | | |||||| || || | ||||| ||||| || || | ||
Sbjct 30215 ATCTGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCAGA 30274
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| || || |||| ||| ||||| |||||||| || | ||||| || |||||
Sbjct 30275 TCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTA 30334
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||||||| | || || ||
Sbjct 30335 CAACATCCAGAAGGAGTCAACCCTCCA 30361
>seq355
Length=9390
Score = 105 bits (116), Expect = 7e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || || || ||||| | || ||||| |||||||| | || || ||| |
Sbjct 9200 AAAATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCT 9259
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | | | |||| ||||| | ||||| ||||| |||||| | ||
Sbjct 9260 TCCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCAGAT 9319
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || ||||| | ||| || || |||||||| || | || || || ||||||
Sbjct 9320 CAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACTCTGTCGGACTAC 9379
Query 40867 AACATCCAGAA 40877
|||||||||||
Sbjct 9380 AACATCCAGAA 9390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514909636983920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |