Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6480 131 1e-25 >seq6480 Length=6706 Score = 131 bits (144), Expect = 1e-25 Identities = 278/411 (68%), Gaps = 12/411 (3%) Strand=Plus/Minus Query 97057 TGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCA 97116 |||||| ||| | |||||||| || || ||||| | ||| || ||||| | || Sbjct 778 TGATTCGAATAGACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCA 719 Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||||||||| | || | || | |||| ||||||||||| || || || Sbjct 718 GTGACATGGGCGATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCG 659 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC------ 97230 |||||||| || || | ||||| | |||||| || || | ||| | || Sbjct 658 AGTCCCATGTCCGCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAG 599 Query 97231 ACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 ||||||||||| | | | || || || || |||| ||||| || || | ||| | Sbjct 598 ACATAAAACTG-CGCCAGGCAGTGGCACGGCGGCAGAGCCATCTTGGGTATATCCACTGG 540 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 |||||| |||| ||| | || | || ||| | || || || ||||||| | || | Sbjct 539 ATTCCATGCACTCATTATGATGCGTCGATCAGAGGGATTGTTGCGTATGGTGTCGATAAC 480 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTT--AAGACCTTGATATTCT 97407 ||| | | |||||||| ||| || ||| |||| | || ||| | ||||| | Sbjct 479 CTGTTGCAGTTGATCAATGCCCTCGCCATTGTAATCATCATTGCAAGTAC--GATATGCG 422 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCT 97458 || || ||||| | |||||| || ||||||| || || | || |||||| Sbjct 421 GCACCGAAATGACGCCATTGAAAACCATAAATGGGACCCAAATCACCTTCT 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346580848189190