Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq102 89.7 9e-13 >seq102 Length=36553 Score = 89.7 bits (98), Expect = 9e-13 Identities = 198/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Minus Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508 || |||||| | |||| |||| |||| || || || || ||||| | || | || Sbjct 13056 CTGTGGAACTCTGCACAGTTGCAACTGGTCAGGGAGGGCAAGATGCACGGATTCCTGCGC 12997 Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568 ||||| ||||| ||||| || || || |||||| || || || | || ||| || Sbjct 12996 ATGTACTGGGCGAAGAAAATTCTCGAGTGGACTGAGACTCCCGAGCAGGCGTTGGAGTAC 12937 Query 189569 AGTAT-CTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 189627 | || ||| | || | |||||| || || || |||||| || || ||||| || Sbjct 12936 TGCATACTACTC-AATGATAAGTACAGCCTGGATGGACGGGATCCCAATGGGTACGTCGG 12878 Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGAT-AGAGCGTGGAAAGAAAGACCGATATTTG 189686 || |||||||| || | || | || ||| || || ||||| || | || |||| Sbjct 12877 CTGCATGTGGTCAGTTGGTGGCGTTCATGATCAGGGC-TGGAAGGAGCGCGACATCTTTG 12819 Query 189687 GAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGC 189738 | |||||| |||| ||||| ||| | | | ||| |||||||||||||| Sbjct 12818 GCAAGATACGATACATGAACTATCAAGGCTGCAAGCGCAAATTTGATGTTGC 12767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922642108742680