Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq355 118 7e-22
seq7704 102 5e-17
seq2274 86.0 4e-12
>seq355
Length=9390
Score = 118 bits (130), Expect = 7e-22
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| ||||||||||| ||||| |||| | || |||| |||||| || |||||||||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| |||||||| || ||| | | ||||||||| || || ||| | || |
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | |||| | ||| || |||| |||||||| ||||| || | ||||||||||||
Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211
Query 34382 ATCTGCAT 34389
||||||||
Sbjct 9210 ATCTGCAT 9203
>seq7704
Length=29863
Score = 102 bits (112), Expect = 5e-17
Identities = 153/215 (71%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| || || |||||||| |||||||| ||||| || ||| | ||
Sbjct 18561 AGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCT 18502
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
||||| |||||||| || || || | |||||||| || || | | || |||||
Sbjct 18501 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCC 18442
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||||| | || | || | ||| | || |||||| || | ||||||||
Sbjct 18441 TGAATCTTG-GCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGT 18383
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391
|| || ||||| ||||| || |||||||||||||
Sbjct 18382 CTTACCCGTGAGGGTTTTAACGAAGATCTGCATCG 18348
>seq2274
Length=37031
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | || || ||||| ||||||||||| ||
Sbjct 30385 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 30326
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| ||||||||| ||||| || || |||||||| || ||
Sbjct 30325 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 30266
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | || | ||| | | || ||
Sbjct 30265 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACC 30206
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| || | || || || || ||||||||
Sbjct 30205 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322882739071520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |