Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 556 1e-153
seq19922 192 5e-44
seq2274 91.5 1e-13
>seq2144
Length=13752
Score = 556 bits (616), Expect = 1e-153
Identities = 1273/1901 (67%), Gaps = 47/1901 (2%)
Strand=Plus/Minus
Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|||| || || |||||||| || || || || ||||| || ||||||||||||||||| |
Sbjct 4933 TCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTC 4874
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
| || || |||||| ||||| | | | ||||| || || |||| || |||||| | |
Sbjct 4873 CTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTG 4814
Query 22224 G--CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281
| || | |||| | | || || || ||||| ||||| || || ||||| ||||| ||
Sbjct 4813 GTTCAGCTACATGAATA--TTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 22282 GGCCATATTTATC----AATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCC 22337
||||| || || | | |||| || |||||||| |||||||| || |||| |
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGAT----ATTTCCCAAACGGTCTTATATAGTTCAC 4700
Query 22338 TGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTA-TTGTGTATGATCAAA 22396
| | | || || |||||| | || | ||| || | ||| | || || |
Sbjct 4699 GCACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCG-ATTATTTGA 4641
Query 22397 TTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTC 22456
||||| || ||| | |||||| | | |||| | ||| | || |||| | |||
Sbjct 4640 TTTTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTC 4581
Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516
|| || |||||||| || |||| || || | | ||| ||||| || ||| | ||||||
Sbjct 4580 ACAACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCG 4521
Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576
||||||||||| || |||| |||||| || ||||| || || ||||| || || | ||
Sbjct 4520 AAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGC 4461
Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGA 22636
|| || || | || |||||||| || || |||||| ||| ||||||||| |||
Sbjct 4460 AGAGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGA 4401
Query 22637 TCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTG 22696
| | || || || | ||||||||| || || | | || || | || ||
Sbjct 4400 TTTGTGGGT---ACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTT 4344
Query 22697 CCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCG 22756
|| || || || || |||| |||| | || | || || || ||||| || ||||| |||
Sbjct 4343 CCCTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCG 4284
Query 22757 CCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTAC 22816
|| || || || || ||||| || | | |||| || | || || ||
Sbjct 4283 CCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAG 4224
Query 22817 GGCATAC-GCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875
|| |||| |||| | | || || || || | || ||||| || || || || || ||
Sbjct 4223 GG-ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACG 4165
Query 22876 GTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935
| | | | || || || |||||||||| ||| || |||| |||||| | |
Sbjct 4164 ATGTCTTAAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTT 4105
Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995
|||||||||| |||| ||||| || || | |||||||||| || |
Sbjct 4104 GTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTA--CGTC 4047
Query 22996 CGATT--GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCG 23053
| || || ||| | |||| || ||||| || | |||||| || || | |||
Sbjct 4046 TTCTCCGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCA 3987
Query 23054 TCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAA 23113
||| | | ||||| |||||||| || || | || || || || || ||||||| |
Sbjct 3986 TCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACA 3927
Query 23114 TTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTC 23173
|| |||||||| || || || |||||||||||| ||||||||||||| ||||| |||
Sbjct 3926 TTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTC 3867
Query 23174 TCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTG---AACACG--TCGCA 23228
|| || || ||||| ||||| || ||| | | ||||| | |||||| | ||
Sbjct 3866 TCCACTTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTGCT 3807
Query 23229 CGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGT 23288
|| ||| |||||| |||| ||| || | | | ||||| | |||| || |
Sbjct 3806 CGACCCT-CCTTCT----CGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACAT 3752
Query 23289 CGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAA 23345
| || || || || | | ||| ||||| || ||| || ||||| ||| |
Sbjct 3751 CAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCA-ATCC--TCATTGGCTTCCA 3695
Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405
|||| ||||||| | ||| |||||||| || || |||||||| || || || || |
Sbjct 3694 CGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCGAGCACGATGTT 3635
Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465
|||||||||| |||||||| || | |||||| || || || || || | |||||| ||||
Sbjct 3634 CCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCT 3575
Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525
||||||||| |||||| || || ||||| || ||| |||||||| || ||||| |||
Sbjct 3574 CGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCA 3515
Query 23526 TGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA 23585
||||| | ||||| ||||| || || | || ||||| | || | ||||
Sbjct 3514 CATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACC----ATTGGTGCCA 3459
Query 23586 C-ACTCGAA---CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641
| | ||||| || || || |||| | || || | | ||| || || || | ||
Sbjct 3458 CTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCACCTGCTGAC 3399
Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701
|| || |||||||| || || | || || | |||| |||||||| ||| |
Sbjct 3398 TTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACC 3339
Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761
| | || | || || ||||||| || | | || || || | ||| |||||
Sbjct 3338 ATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTT 3279
Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821
|| ||| || || ||| | | | ||| | | |||||| || || | |||| ||||
Sbjct 3278 GGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCA 3219
Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACC 23881
|| || ||||| |||||||||||||| || ||||||| ||||| || || | || |
Sbjct 3218 ATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCA 3159
Query 23882 GTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941
||| || ||||| |||| ||| || || | || || || ||||||||||| | |
Sbjct 3158 ACTTTGCCATTGATTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTA 3099
Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACG 23982
||| ||| |||||||||| | ||||| || || |||||
Sbjct 3098 TAGCCAAAATCACGATCGTATATAATGGCAGAGTTTAAACG 3058
>seq19922
Length=1369
Score = 192 bits (212), Expect = 5e-44
Identities = 378/553 (68%), Gaps = 21/553 (4%)
Strand=Plus/Plus
Query 57586 AAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCG 57645
||||||| ||||| || || |||||||| || ||||| || || || ||||| ||| ||
Sbjct 680 AAAAGGCCGAAGCTTCATTCTGGACCGTGGAGGAAGTGGATCTATCCAAGGACATGACCG 739
Query 57646 ATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCG 57705
| |||| | || | ||| |||| | | || ||| ||| || ||||| || || |
Sbjct 740 ACTGGGCTCGACTAACAGACAATGAGCGTCACTTCATTTCACATGTTTTGGCTTTCTTTG 799
Query 57706 CCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAG 57765
|||| || || || |||||||| |||||| | ||||| | || || |||||||||
Sbjct 800 CCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCCAGGAAGTGCAAA 859
Query 57766 TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAA 57825
| || ||||| | |||||||| || || || | ||||| || || || || || ||||
Sbjct 860 TCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAAA 919
Query 57826 TGTATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTG 57881
|||| | |||||||| || ||| | ||| || | || || || ||
Sbjct 920 TGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATCAGCGCGAC---TAC-CTC 975
Query 57882 TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAA 57938
||||| || || ||||| |||||||| | ||| |||||||| ||| | |
Sbjct 976 TTCAATGCCATTGAAACGATGCCCGCTGTG---AAGCGTAAGGCAGATTGGGCTCTGTCT 1032
Query 57939 TGGATAAAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995
||||| | | | |||| | || | |||| | | || || || || || |||
Sbjct 1033 TGGATCTC---CTCGAAGGCGGCAAACTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTC 1089
Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055
||||| || ||||| ||||| |||||| | || || ||| ||||||| || || ||
Sbjct 1090 GAAGGCATCTTCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTT 1149
Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115
|||||||| || || || || ||| |||| || ||||||||||| || ||| |||
Sbjct 1150 ATGCCCGGTCTTACCTTCTCGAATGAGCTGATCTCCCGCGACGAGGGACTTCATTGCGAT 1209
Query 58116 TTTGC-GTGCCTA 58127
||||| |||| ||
Sbjct 1210 TTTGCTGTGCTTA 1222
>seq2274
Length=37031
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
|| || ||||| |||||||| ||||| |||| ||||| || |||||| | || || ||
Sbjct 30153 TCCAAAATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAG 30212
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| || || | | || | ||||| | || ||||||||| || | || ||
Sbjct 30213 CCATCTGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCA 30272
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
|| ||||||||||| || ||||||||||| ||| |||| || | ||| | ||
Sbjct 30273 GATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGAC 30332
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || || || || || |||| || | ||| | || ||||
Sbjct 30333 TACAACATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTGCGTGGTGGTA 30387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445498566830640
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