Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6480 132 1e-25 seq19922 104 5e-17 >seq6480 Length=6706 Score = 132 bits (146), Expect = 1e-25 Identities = 225/320 (70%), Gaps = 16/320 (5%) Strand=Plus/Plus Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451 ||| || |||||||| ||| | || || || |||||||||||||| ||||| | |||| Sbjct 371 AGAAGGTGATTTGGGTCCCATTTATGGTTTTCAATGGCGTCATTTCGGTGCCGCATATCG 430 Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATA--TACTAAAG 35509 ||| || | ||||| | ||| |||| ||||||||| || ||| | | | | Sbjct 431 TACTTGCAATGATGATTACAATGGCGAGGGCATTGATCAACTG--CAACAGGTTATCGAC 488 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGAT 35569 ||| | | | ||||| |||| || | || || |||| ||||||||||| ||||| Sbjct 489 ACCATACGCAACAATCCCTCTGATCGACGCATCATAATGAGTGCATGGAATCCAGTGGAT 548 Query 35570 CTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGT------GGC 35622 | | | |||||||| || || |||||| || || || || |||||||| | | Sbjct 549 ATACCCAAGATGGCTCTGCCGCCGTGCCAC-TGCCTGGCGCAGTTTTATGTCTCACAGTC 607 Query 35623 TAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAA--GCGGAGATGTCGGGTTGGGCGTG 35680 | ||| ||| | ||||| ||| |||||||||| | ||||| ||| || | ||||| Sbjct 608 TCGTGGTGAACTCTCGTGTCAGCTGTATCAGCGCAGTGCGGACATG--GGACTCGGCGTT 665 Query 35681 CCCTTCAATATTGCATCATA 35700 ||||| || |||||||| || Sbjct 666 CCCTTTAACATTGCATCCTA 685 >seq19922 Length=1369 Score = 104 bits (114), Expect = 5e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 ||||||||||||| || ||||| |||||||| || || || || || || |||||| Sbjct 1073 TTGCCTTTGCTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGC 1132 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| || |||| ||||| |||| ||| |||||| | || || | |||| Sbjct 1133 TGAAGAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTGATCTCCCGCGACG 1192 Query 102039 AAGGTCTTCATCGCGACTTTGC 102060 | || |||||| |||| ||||| Sbjct 1193 AGGGACTTCATTGCGATTTTGC 1214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988974556343985