Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq6480 132 1e-25
seq19922 104 5e-17
>seq6480
Length=6706
Score = 132 bits (146), Expect = 1e-25
Identities = 225/320 (70%), Gaps = 16/320 (5%)
Strand=Plus/Plus
Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGA 35451
||| || |||||||| ||| | || || || |||||||||||||| ||||| | ||||
Sbjct 371 AGAAGGTGATTTGGGTCCCATTTATGGTTTTCAATGGCGTCATTTCGGTGCCGCATATCG 430
Query 35452 TACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATA--TACTAAAG 35509
||| || | ||||| | ||| |||| ||||||||| || ||| | | | |
Sbjct 431 TACTTGCAATGATGATTACAATGGCGAGGGCATTGATCAACTG--CAACAGGTTATCGAC 488
Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGAT 35569
||| | | | ||||| |||| || | || || |||| ||||||||||| |||||
Sbjct 489 ACCATACGCAACAATCCCTCTGATCGACGCATCATAATGAGTGCATGGAATCCAGTGGAT 548
Query 35570 CTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGT------GGC 35622
| | | |||||||| || || |||||| || || || || |||||||| | |
Sbjct 549 ATACCCAAGATGGCTCTGCCGCCGTGCCAC-TGCCTGGCGCAGTTTTATGTCTCACAGTC 607
Query 35623 TAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAA--GCGGAGATGTCGGGTTGGGCGTG 35680
| ||| ||| | ||||| ||| |||||||||| | ||||| ||| || | |||||
Sbjct 608 TCGTGGTGAACTCTCGTGTCAGCTGTATCAGCGCAGTGCGGACATG--GGACTCGGCGTT 665
Query 35681 CCCTTCAATATTGCATCATA 35700
||||| || |||||||| ||
Sbjct 666 CCCTTTAACATTGCATCCTA 685
>seq19922
Length=1369
Score = 104 bits (114), Expect = 5e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||||||||| || ||||| |||||||| || || || || || || ||||||
Sbjct 1073 TTGCCTTTGCTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGC 1132
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| || |||| ||||| |||| ||| |||||| | || || | ||||
Sbjct 1133 TGAAGAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCGAATGAGCTGATCTCCCGCGACG 1192
Query 102039 AAGGTCTTCATCGCGACTTTGC 102060
| || |||||| |||| |||||
Sbjct 1193 AGGGACTTCATTGCGATTTTGC 1214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988974556343985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |