Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 444 7e-120
seq19922 197 2e-45
>seq2144
Length=13752
Score = 444 bits (492), Expect = 7e-120
Identities = 1231/1873 (66%), Gaps = 26/1873 (1%)
Strand=Plus/Minus
Query 62033 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 62092
|| ||| || | || || ||||| | | || ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 62093 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 62152
||| ||||| ||||| |||| | | ||||| || || || || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 62153 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62212
|| || |||| ||| ||||| | |||||||||||||| ||||| ||||| | |||||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 62213 AGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAA---CTCGCTT 62269
|||||||| || | | |||| | |||||||||| || ||||| | | |||
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC-- 4698
Query 62270 AATATCTTCTGGAAGGTTT---GTATTCTGAATGGATCCACCATCTACCATAATCCTATT 62326
| || || |||| |||| | || || ||||| |||| | | | || || |||
Sbjct 4697 -ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATT 4639
Query 62327 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAAC 62386
|| || ||||||| ||| || | ||||||| | | | | | ||| | || ||
Sbjct 4638 TTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCAC 4579
Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446
|| || || |||||||||| |||| | ||||| || || || || ||||| |
Sbjct 4578 AACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAA 4519
Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506
|| |||||||| |||| || || || || ||||| || ||||| ||||| | | |
Sbjct 4518 AGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAG 4459
Query 62507 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATC 62566
| ||| | | |||| | || || || || || || | |||| | ||| ||||
Sbjct 4458 AGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATT 4399
Query 62567 CGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTA 62625
| ||||| | ||| || |||||||| || || | | || |||
Sbjct 4398 TGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGAC-TTCCCT 4340
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || ||||| | || || |||||||| || | ||| || || || ||||| || |
Sbjct 4339 CATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCAT 4280
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
| ||||||||||| || |||| | ||| ||| || | || ||| | ||||
Sbjct 4279 AGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGAT 4220
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | ||| || || || || | ||||||||| ||||| || || || | |||||
Sbjct 4219 ACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTC 4160
Query 62806 TCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 62863
| | | | | |||||| ||| || || | ||| || ||||| ||||| || || || ||
Sbjct 4159 T-TAAGTTG-GATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTT 4102
Query 62864 GAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATC-GCCC 62920
| ||| || || | ||| || || || || || | ||| || | || | |
Sbjct 4101 CAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTC 4042
Query 62921 ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC 62980
| |||| ||||| || | || | ||||||| ||| || || || | ||||| |
Sbjct 4041 CGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGG 3982
Query 62981 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 63040
| | ||| | | || |||||||| | ||||| || || || || || | ||||||
Sbjct 3981 TGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTG 3922
Query 63041 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63100
||| || ||||| |||||||| |||||| | || ||| | || || ||||| || |
Sbjct 3921 TTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCAC 3862
Query 63101 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCC 63159
|| || || || || || ||| | | | ||||||| || | | |||||| || |
Sbjct 3861 TTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTG-CTCGAC 3803
Query 63160 TTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 63219
|| | |||||| ||||| | || |||| || |||||||||| | | ||
Sbjct 3802 CCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTC 3743
Query 63220 TAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63279
||||| | | ||| ||||||| ||||| || | | | | ||| || |||||||
Sbjct 3742 CTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAA 3683
Query 63280 AGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338
| | ||| || ||||| || || ||| || ||||| | | | ||||||||| || ||
Sbjct 3682 ACAAATCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCA 3624
Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
|| ||||| |||||||| | |||| | | | ||| |||||||| || || | ||| |||
Sbjct 3623 GTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATG 3564
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | ||||||| | |||| || |||||||| | || | || || ||| |
Sbjct 3563 GCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAAT 3504
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
||||||| ||| |||| | || || ||| |||||||||| || || | |||
Sbjct 3503 ACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCC 3444
Query 63519 CTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576
|||| ||||| | | | ||| ||||| || || ||||| || ||||| | |
Sbjct 3443 TTGGCCCGAATGCAATGCACATT--CAGACCAATACCACCTGCTGACTTTGAGATCATCG 3386
Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636
| || | | | | | | |||| || || || ||| | |||| | || ||||
Sbjct 3385 CACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAA 3326
Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696
| || ||||| || | || || ||| | || || | || || || || || |
Sbjct 3325 AGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTG 3266
Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63756
| || | ||| ||||| | |||||| ||||| | || || || ||||| | ||
Sbjct 3265 TGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCAT 3206
Query 63757 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTA 63816
| || || | || || ||||| | ||||||||| || | |||| ||| |||| || |
Sbjct 3205 GTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGA 3146
Query 63817 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63876
|||| ||||| || ||| |||||||| || || |||||||| || || ||| || |
Sbjct 3145 TTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCAC 3086
Query 63877 GTTCGTAAATAAT 63889
| ||||| |||||
Sbjct 3085 GATCGTATATAAT 3073
>seq19922
Length=1369
Score = 197 bits (218), Expect = 2e-45
Identities = 366/535 (68%), Gaps = 3/535 (1%)
Strand=Plus/Minus
Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644
|| |||||||| || || |||||||| | || | || || || || || || |||
Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155
Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704
||||| || |||||||| || ||||| || || || || || ||| ||||||||
Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATG 1095
Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCTGTCATGTA--TC 33761
||||| || |||||||||||||| | | ||| ||| | || || || | | ||
Sbjct 1094 CCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAGATC 1035
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| |||||||||| ||||| || ||| ||||||||||| |||||||| |||
Sbjct 1034 CAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAG 975
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881
|| |||| | || ||| || ||||| ||||| | | || |||||||||
Sbjct 974 AGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCC 915
Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941
|| || | || || ||||| ||||| || || || || || | ||||| || || |||
Sbjct 914 GAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTGC 855
Query 33942 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAA 34001
||||| | || || || | | ||| ||||| || || || ||| ||| |||||
Sbjct 854 ACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAAG 795
Query 34002 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 34061
|| ||||| |||||| || || | || | ||||||| | ||| || |
Sbjct 794 AAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGTC 735
Query 34062 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 34116
|| || || |||| ||||||||| ||||| ||||| ||||| || || |||||||
Sbjct 734 ATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629439181967760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |