Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2144 228 8e-55 >seq2144 Length=13752 Score = 228 bits (252), Expect = 8e-55 Identities = 1176/1856 (63%), Gaps = 46/1856 (2%) Strand=Plus/Minus Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864 |||| ||| | ||||| || || | | |||||||||||| ||||| || ||| | || Sbjct 4913 ATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTAAGACCCGCTTTC 4854 Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924 || | | ||||| || ||||| || | || | || | | ||| || || | Sbjct 4853 CAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCTACATGAATATTA 4794 Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984 | |||||||||||||| || || || || | || |||||||||| | | | ||| Sbjct 4793 AAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATTGTGGACTTT 4734 Query 36985 TGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAA-ATG 37043 ||||| |||||||| || ||||||| || | ||| | || | | | ||| Sbjct 4733 ACGGATATTTCCCAAACGGTCTTATATAGTTCACGCACATTTTGAGGAATGTTTTCGATG 4674 Query 37044 TT--GAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTT 37101 || | || || ||| | | | ||| ||| || || |||| || ||||| | Sbjct 4673 TTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTTCATATCATCATCCCACAAGT-- 4616 Query 37102 CTACTTA--TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATA 37159 | | || |||| || | ||| | || |||| ||||||||||| |||||||| | | Sbjct 4615 CCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAGACAGCA 4556 Query 37160 CTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTT 37219 ||| |||||| || || || ||| || ||||| | || |||||||||| | ||| | Sbjct 4555 CTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCT 4496 Query 37220 GAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTAT 37279 | | ||| ||||| || ||||||||||| || || || ||| | || ||| || | Sbjct 4495 GGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGC 4436 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAA-CCACATA 37338 | || ||| || |||| ||| ||||| | || ||| |||| | ||| ||||||| Sbjct 4435 TTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT-GGGTACCTTATTCCACATA 4377 Query 37339 TCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAA 37398 ||||| || |||||||| || || ||||| | | ||| |||||||| | || | Sbjct 4376 TCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATAGGTCTCATACGTGCCATCT 4317 Query 37399 ATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGT 37458 | | ||| || || || || | ||| | |||| |||| || || |||||||| || ||| Sbjct 4316 TTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGT 4257 Query 37459 ATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCA 37518 ||| | | || | || || || | | ||| | || ||| || || |||| Sbjct 4256 TGATTCAGAAGACACGCCTTATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCT 4197 Query 37519 GCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTA--TTAGATCTAGACGATT 37576 || | || ||||| || || || || || | ||| ||||| || ||| | | | Sbjct 4196 GCAAGTCCTTGAACTCCAATTCCAATTGGACGATG--TCTTAAGTTGGATTTCTTAGCCT 4139 Query 37577 CTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCG 37636 | || || || ||||||||||| || || || || | ||||| | || || | Sbjct 4138 CGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGG 4079 Query 37637 TAATTATTCTCAACTT------GTCGAACAT-AAATACGTTATTATTAACAAATTTACTC 37689 | | | | | ||| |||| || | | || | ||| |||| || | Sbjct 4078 TGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCCGGTGTTACGAACA----TATTG 4023 Query 37690 AACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAAT--TGTATAA 37747 | | || ||| | | ||| || ||||||| |||||| | | | ||| | | || Sbjct 4022 AGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCT--GGTGCAGAATACTCAACAA 3965 Query 37748 TCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTAT 37807 | || || || | ||||| || ||||||| |||| ||| ||| ||| || | Sbjct 3964 TTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGT 3905 Query 37808 TACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAG 37867 |||| ||||| || | || || ||||| || || || | ||| | ||| || || | Sbjct 3904 TACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGG 3845 Query 37868 ATTTCCATA--AACT---TCTTGCTTTAACGA-TCGCTTTAAtttttttCTTTGTTTCGT 37921 ||| | | | |||| | |||| | ||| | | ||| |||| Sbjct 3844 CAAACCAAAGGGATTGAGCCTTGATAACACGATTTGCTCGACCCTCCTTC------TCGT 3791 Query 37922 ATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGC 37981 ||| | |||| | | | ||| | || ||||| ||||| | ||||||||| | | Sbjct 3790 ATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGT 3731 Query 37982 ATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTA 38041 || ||||| || ||||| || |||| ||| ||||| | |||||| ||||| |||| Sbjct 3730 GCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTA 3671 Query 38042 CCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTA 38101 ||| | ||| || | ||| | | || ||| || || || ||| |||||| Sbjct 3670 TCCACAGGGCATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAGTGTTC-TTCTTA 3612 Query 38102 AGCT-TAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCT 38160 || | | || || || | ||| | ||||| || || | ||||| | | ||||| Sbjct 3611 AGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCA 3552 Query 38161 GGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATA 38220 |||||||| | || ||||||| | ||| | | || ||| ||| ||| | |||| Sbjct 3551 GGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATACTCTCAGCATA 3492 Query 38221 GGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTAT- 38279 || || | ||||| ||| | || || | || || |||| ||||| || || || Sbjct 3491 GGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCTTGGCCCGAATG 3432 Query 38280 -ATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTA 38338 | | | || || || || |||||||| ||||| || | || || || | | Sbjct 3431 CAATGCACAT--TCAGACCAATACCACCTGCTGACTTTGAGATCATCGCACACTGCTCCA 3374 Query 38339 ACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACA 38398 | | ||| || || || || |||| || | || | ||| || ||||| Sbjct 3373 CAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAAGCATGAAGACA 3314 Query 38399 TTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTT 38458 ||||| || ||| | || || | ||| || || |||||| |||| | || Sbjct 3313 GCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTT 3254 Query 38459 CCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAG 38518 |||| | |||| || || || | | | ||| |||||| | || || ||||| | | Sbjct 3253 CCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATGTATACCGATGG 3194 Query 38519 ATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGAT 38578 || | ||| ||||| || ||||| | ||| | ||| ||| ||| | | || Sbjct 3193 CAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGATTTTTAACAAAT 3134 Query 38579 ACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTAT 38634 ||||| || || || || | |||||||||| |||| | |||| | ||||||| Sbjct 3133 ACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCACGATCGTAT 3078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468243292730480