Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq6480 114 1e-20
>seq6480
Length=6706
Score = 114 bits (126), Expect = 1e-20
Identities = 181/260 (70%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGA 21005
|| || || || || |||||||||||||||||||| || || | || ||||| ||
Sbjct 769 TAGACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGG 710
Query 21006 GCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATG 21065
||||||| || || || || || ||| || |||||||| || || ||||| ||||||
Sbjct 709 GCGATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATG 650
Query 21066 TCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC------ACGTAAAAC 21119
|| || | ||| |||||||| || || || || || |||| | || ||||||
Sbjct 649 TCCGCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAAC 590
Query 21120 TGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179
|| || ||| || || || ||||||||| | | ||| | || ||||| ||
Sbjct 589 TGCGCCAGGCAGTGGCACGGCGGCAGAGCCATCTTGGGTATATCCACTGGATTCCATGCA 530
Query 21180 CACATAACGATGCGCCGATC 21199
| ||| | |||||| |||||
Sbjct 529 CTCATTATGATGCGTCGATC 510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427525401734160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |