Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6480 114 1e-20 >seq6480 Length=6706 Score = 114 bits (126), Expect = 1e-20 Identities = 181/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGA 21005 || || || || || |||||||||||||||||||| || || | || ||||| || Sbjct 769 TAGACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGG 710 Query 21006 GCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATG 21065 ||||||| || || || || || ||| || |||||||| || || ||||| |||||| Sbjct 709 GCGATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATG 650 Query 21066 TCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC------ACGTAAAAC 21119 || || | ||| |||||||| || || || || || |||| | || |||||| Sbjct 649 TCCGCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAAC 590 Query 21120 TGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || || ||| || || || ||||||||| | | ||| | || ||||| || Sbjct 589 TGCGCCAGGCAGTGGCACGGCGGCAGAGCCATCTTGGGTATATCCACTGGATTCCATGCA 530 Query 21180 CACATAACGATGCGCCGATC 21199 | ||| | |||||| ||||| Sbjct 529 CTCATTATGATGCGTCGATC 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427525401734160