Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 522 4e-143
seq19922 217 2e-51
>seq2144
Length=13752
Score = 522 bits (578), Expect = 4e-143
Identities = 1254/1883 (67%), Gaps = 28/1883 (1%)
Strand=Plus/Minus
Query 78705 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 78764
|| ||| || | || || ||||| | | || ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 78765 TCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACT 78824
||| ||||| ||||| |||| | ||||||| || || || || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 78825 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 78884
|| || |||| ||| ||||| | |||||||||||||| ||||| ||||| | |||||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 78885 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT---CGCTT 78941
|||||||| || | | |||| | |||||||||| || ||||| | | |||
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC-- 4698
Query 78942 AATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 78998
| || || |||| |||| | || || ||||| |||| | ||| || || |||
Sbjct 4697 -ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATT 4639
Query 78999 CTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 79058
|| || || |||| ||| || | ||||||| | | | | | ||| |||| ||
Sbjct 4638 TTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCAC 4579
Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118
|| ||||| |||||||||| |||| | ||||| || || || || ||||| |
Sbjct 4578 AACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAA 4519
Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178
||||||||||| |||| || || || || |||||||||||||| ||||| | | |
Sbjct 4518 AGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAG 4459
Query 79179 ACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTC--CCAATCCCAAAGA 79236
| ||| | | |||| || || || || || ||| ||| ||| ||||| |||
Sbjct 4458 AGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTT--GAGTTTCGCCCAGTCCCAGAGA 4401
Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCT 79296
| | || || |||||| | |||||| || |||||||| || ||| | |||
Sbjct 4400 TTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341
Query 79297 GTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCG 79356
|| || ||||| | || || || || || | ||||| || || || ||||| ||
Sbjct 4340 TCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCA 4281
Query 79357 TAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGA 79416
|| |||||||||||||| |||| | ||| ||| || | || ||| | |||
Sbjct 4280 TAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGGA 4221
Query 79417 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 79476
|| | | ||| || || ||||| | ||||||||| ||||| || || || | ||||
Sbjct 4220 TACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGT 4161
Query 79477 CTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 79536
|| || || | | ||| || || | ||| || ||||| ||||| || || || ||
Sbjct 4160 CTTAAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTC 4101
Query 79537 AGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA--TCGTC-CA 79593
| || || | | ||| || || || || || | ||| || | || || |
Sbjct 4100 AAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTCC 4041
Query 79594 TCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 79653
| |||| ||||| || | || | ||||||| ||| ||||| || | ||||| |
Sbjct 4040 GGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGT 3981
Query 79654 TCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGT 79713
| | ||| | | ||||||||||| | |||||| || ||||| || || | |||||||
Sbjct 3980 GCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGT 3921
Query 79714 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATC 79773
|| || ||||| |||||||| |||||| | || ||| |||| || ||||| || |
Sbjct 3920 TGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACT 3861
Query 79774 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGTATCTCTT 79832
|| || || || || || ||| | | | ||||||| || | | || ||| |||
Sbjct 3860 TGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTG---CTCGA 3804
Query 79833 TTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAAT 79890
||| ||| ||||| |||||| | || |||| || ||||||||||| | | |
Sbjct 3803 CCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGT 3744
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
|| ||||| | || || ||||||| ||||| || ||| | | || || ||||||
Sbjct 3743 CCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATA 3684
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|| | ||| || ||||| || || ||| || ||||| | | | ||| ||||| || ||
Sbjct 3683 AACAAATCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCC 3625
Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069
|| ||||| |||||||| | |||| | | | ||| |||||||| || || | ||| ||
Sbjct 3624 AGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAAT 3565
Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129
||| | | |||| |||| |||| || |||||||| | || | || || ||| |
Sbjct 3564 GGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAA 3505
Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189
||||||| ||| |||| | |||||||||||||||||||| || || | ||||
Sbjct 3504 TACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCC 3445
Query 80190 ACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247
|||| ||||| | | | ||| ||||| || || ||||| || ||||| |
Sbjct 3444 CTTGGCCCGAATGCAATGCACATT--CAGACCAATACCACCTGCTGACTTTGAGATCATC 3387
Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307
|| || | | | | | | |||| ||||| || ||| | |||| | || |||
Sbjct 3386 GCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGA 3327
Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367
|| || ||||| || | || | ||| | || || | || || || || ||
Sbjct 3326 AAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGT 3267
Query 80368 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA 80427
|| || | ||| || || | |||||| ||||| | || || || ||||| | |
Sbjct 3266 GTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCA 3207
Query 80428 TGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTT 80487
|| || || | || || ||||| | ||||||||| || | |||| | | ||| |||
Sbjct 3206 TGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTG 3147
Query 80488 ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 80547
||||| ||||| || ||| |||||||| || || |||||||| || || ||| ||
Sbjct 3146 ATTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAATCA 3087
Query 80548 CGTTCGTAAATAATAACCGAGTT 80570
|| ||||| ||||| | |||||
Sbjct 3086 CGATCGTATATAATGGCAGAGTT 3064
>seq19922
Length=1369
Score = 217 bits (240), Expect = 2e-51
Identities = 373/537 (69%), Gaps = 7/537 (1%)
Strand=Plus/Minus
Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022
|| |||||||| || || |||||||| | || || || || || || || || |||
Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155
Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--TGACCCAGAAAAGAAGA 50080
||||| || |||||||| || ||||| || || |||||||| || | | ||| |||||
Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAA--GAAGA 1097
Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTCATGTA-- 50137
| ||||| || || |||||||||| | | ||| ||| | | || || || | |
Sbjct 1096 TGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAGA 1037
Query 50138 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAA 50197
|||| |||||||||| ||||| || ||| ||||||||||| |||||||| |
Sbjct 1036 TCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGA 977
Query 50198 AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTT 50257
|||| |||| | || ||| || ||||| ||||| | | || |||||||
Sbjct 976 AGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTT 917
Query 50258 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 50317
|||| || | || || ||||| ||||| || || || || || | ||||| || || |
Sbjct 916 CCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTT 857
Query 50318 GCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 50377
||||||| | || || || | | ||| ||||| || || |||||| ||| ||||
Sbjct 856 GCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAA 797
Query 50378 AAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCAT 50437
| || ||||| |||||| || || || || ||| ||||||| | ||| ||
Sbjct 796 AGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGG 737
Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 50494
| || || || |||| ||| ||||| ||||| ||||| ||||| || || |||||||
Sbjct 736 TCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717837237169880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |