Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 105 6e-18
>seq19922
Length=1369
Score = 105 bits (116), Expect = 6e-18
Identities = 342/527 (65%), Gaps = 3/527 (1%)
Strand=Plus/Minus
Query 13868 TAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926
||| ||| |||||||| |||||||| ||||| || | || || || || || || |
Sbjct 1222 TAAGCACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGG 1163
Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986
| | || ||||| | || || || || | ||| || || | ||||| ||| |
Sbjct 1162 TAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGA 1103
Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046
|||| || || || || |||||||| || || | || || ||||| ||| ||
Sbjct 1102 AGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCG 1043
Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106
|| ||||| |||||| || | || || | | ||| |||||||| |
Sbjct 1042 AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGG 983
Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14166
|||| || | || || || | | | |||||| || || || || | ||| |
Sbjct 982 CATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGT 923
Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226
||||||| ||||| | || ||||| || ||||| || ||||||||||| | || || |
Sbjct 922 ACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTG 863
Query 14227 ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286
||| |||||| | || | ||| | | ||| |||||||| || || ||| |
Sbjct 862 TGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGG 803
Query 14287 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTTC 14345
| ||||| || ||||| | | | ||| |||| |||| || |||| ||| |
Sbjct 802 CGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTT-AGTCGAGCC 744
Query 14346 CAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
|| |||| | ||||| || ||||| ||||| || || ||||| ||
Sbjct 743 CAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAA 697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479439761427800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |