Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq19922 105 6e-18 >seq19922 Length=1369 Score = 105 bits (116), Expect = 6e-18 Identities = 342/527 (65%), Gaps = 3/527 (1%) Strand=Plus/Minus Query 13868 TAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13926 ||| ||| |||||||| |||||||| ||||| || | || || || || || || | Sbjct 1222 TAAGCACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGG 1163 Query 13927 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAA 13986 | | || ||||| | || || || || | ||| || || | ||||| ||| | Sbjct 1162 TAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGA 1103 Query 13987 AGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT 14046 |||| || || || || |||||||| || || | || || ||||| ||| || Sbjct 1102 AGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCG 1043 Query 14047 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14106 || ||||| |||||| || | || || | | ||| |||||||| | Sbjct 1042 AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGG 983 Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14166 |||| || | || || || | | | |||||| || || || || | ||| | Sbjct 982 CATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGT 923 Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226 ||||||| ||||| | || ||||| || ||||| || ||||||||||| | || || | Sbjct 922 ACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTG 863 Query 14227 ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14286 ||| |||||| | || | ||| | | ||| |||||||| || || ||| | Sbjct 862 TGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGG 803 Query 14287 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTTC 14345 | ||||| || ||||| | | | ||| |||| |||| || |||| ||| | Sbjct 802 CGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTT-AGTCGAGCC 744 Query 14346 CAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 || |||| | ||||| || ||||| ||||| || || ||||| || Sbjct 743 CAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAA 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479439761427800