Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 87.8 2e-12
>seq19922
Length=1369
Score = 87.8 bits (96), Expect = 2e-12
Identities = 340/528 (64%), Gaps = 5/528 (1%)
Strand=Plus/Minus
Query 13656 TAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714
||| ||| |||||||| |||||||| ||||| || | || || || || || || |
Sbjct 1222 TAAGCACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGG 1163
Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774
| | || ||||| | || || || || | ||| || || | || || ||| |
Sbjct 1162 TAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGA 1103
Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834
|||| || || || || |||||||| || || | || || ||||| ||| ||
Sbjct 1102 AGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCG 1043
Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894
|| ||||| |||||| || | || || | | ||| ||||| || |
Sbjct 1042 AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGG 983
Query 13895 CATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 13954
||||||| | | || || | | | |||||| || || || || | ||| |
Sbjct 982 CATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGT 923
Query 13955 ACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014
||||||| ||||| | || || || || ||||| || |||||||| || | || ||||
Sbjct 922 ACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTG 863
Query 14015 ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTT-TCATTAACAATACCATCACTA 14073
||| || ||| | || | || | |||| || ||||||||||| || |||
Sbjct 862 TGATTTGCACTTCCTGGCTGAAGCGCTC-GACAAGATTCTCATTAACAATGCCGTCAGAG 804
Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTT 14132
|| ||||| || ||||| | | | ||| |||| |||| || |||| |||
Sbjct 803 GCGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTT-AGTCGAGC 745
Query 14133 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
||| |||| | ||||| || ||||| ||||| || || ||||| ||
Sbjct 744 CCAGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAA 697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478301245901880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |