Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq7704 111 2e-19
seq2144 86.0 6e-12
>seq7704
Length=29863
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|| || || | ||| || ||||| || |||||||||||| | |||| |||||
Sbjct 18558 ACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCC 18499
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
| ||| || |||||| |||||| ||| |||||||| ||||| || ||||||||||| |
Sbjct 18498 AATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGA 18439
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
|| || ||| | | ||| | || |||| ||||| || |||| ||| | |||||
Sbjct 18438 ATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTA 18379
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | ||||| ||||| || |||||
Sbjct 18378 CCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
>seq2144
Length=13752
Score = 86.0 bits (94), Expect = 6e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 157047 TATTGACGGCAATCGACGCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAATATTGTA 157106
|||||| || ||||| || | ||| || || ||| | || || || || |||| | |
Sbjct 4027 TATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCAGAATACTCAA 3968
Query 157107 CTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTTTGATTGCTTTTGC 157166
| ||||| | ||||| || |||||||| || || ||| ||| ||||| ||||
Sbjct 3967 CAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGC 3908
Query 157167 GGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTATGA 157226
|||| || | |||||| | | ||||||||||||||| || || |||| || ||||
Sbjct 3907 GGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGA 3848
Query 157227 TG 157228
||
Sbjct 3847 TG 3846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506709766735440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |