Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_004745.1
Length=30728
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 158 2e-34
>seq47809
Length=786
Score = 158 bits (174), Expect = 2e-34
Identities = 140/175 (80%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 10489 CTCGCCGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTC 10548
|| ||||| |||||||| || ||||||||||||||||||||||| |||| || || ||
Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69
Query 10549 GCCCGTACCCTGACGCTGGAATCTGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 10608
||||| || || |||||||||| ||||| ||||||||||| || | |||||||||||
Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129
Query 10609 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGG 10663
|| || || | | || ||||| |||||||| || ||| ||| ||||||||||
Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGG 184
Score = 102 bits (112), Expect = 2e-17
Identities = 171/245 (70%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 11017 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 11076
||||||||||| ||||| ||||| | |||||| |||| | ||| | || | |||
Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516
Query 11077 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG-CGCGGCCGCAGTaaaaaa 11135
|| ||||| |||||||| || ||| ||||| | || ||| || || | | ||
Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAA 575
Query 11136 aCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCAT 11195
|||| || || |||| || |||||||| | || || ||||| || |||| || ||
Sbjct 576 ACTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAAT 635
Query 11196 TTATGCCGCTTTGCATGTGGAAGGCGTGCAGCGTGTCGAACTGACTGCACCACTGGCTGA 11255
|| ||||| |||||| ||||| ||||| || || ||| ||| | || | ||| ||
Sbjct 636 CTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCCGA 695
Query 11256 CATCG 11260
|||||
Sbjct 696 CATCG 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 98151943303260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |