Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq47809 158 2e-34 >seq47809 Length=786 Score = 158 bits (174), Expect = 2e-34 Identities = 140/175 (80%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 10489 CTCGCCGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTC 10548 || ||||| |||||||| || ||||||||||||||||||||||| |||| || || || Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 10549 GCCCGTACCCTGACGCTGGAATCTGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 10608 ||||| || || |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 10609 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGG 10663 || || || | | || ||||| |||||||| || ||| ||| |||||||||| Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGG 184 Score = 102 bits (112), Expect = 2e-17 Identities = 171/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 11017 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCC 11076 ||||||||||| ||||| ||||| | |||||| |||| | ||| | || | ||| Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516 Query 11077 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCATCCG-CGCGGCCGCAGTaaaaaa 11135 || ||||| |||||||| || ||| ||||| | || ||| || || | | || Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAA 575 Query 11136 aCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCAT 11195 |||| || || |||| || |||||||| | || || ||||| || |||| || || Sbjct 576 ACTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAAT 635 Query 11196 TTATGCCGCTTTGCATGTGGAAGGCGTGCAGCGTGTCGAACTGACTGCACCACTGGCTGA 11255 || ||||| |||||| ||||| ||||| || || ||| ||| | || | ||| || Sbjct 636 CTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCCGA 695 Query 11256 CATCG 11260 ||||| Sbjct 696 CATCG 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98151943303260