Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 190 2e-43
>seq42801
Length=1186
Score = 190 bits (210), Expect = 2e-43
Identities = 390/575 (68%), Gaps = 25/575 (4%)
Strand=Plus/Minus
Query 100319 ATTTGGCGATAATCGACAACGCCGTCTTCCCAAGTGCCGGTCACGGGCCCGGCAGCTGTG 100378
|| ||||| || || || | ||||| ||||| ||||| | || ||||||| || |||
Sbjct 564 ATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTG 505
Query 100379 CCTGTGAA---ATAGTTGTCACCGTCATAGCCCGCCACGCCTGTCCAACCGCGGCCGTAC 100435
|| ||||| | ||||| || |||| ||| || |||||||||||||| |||
Sbjct 504 CCGGTGAACGGAATGTTGTTCTGGT---AGCCGTTCACCCCGGTCCAACCGCGGCCATAC 448
Query 100436 ATGGCAACGCCCACAATAATTTTGCGCGGGTCCACGCCCTGGTTCGTGAGCAATTTCACG 100495
||||| ||| || | || |||| ||| | |||||||| | ||| ||||||
Sbjct 447 ATGGCGGTGCCGACGACGATCTTGCCCGGCTTGACGCCCTGCGCCAGCAGCGCATTCACG 388
Query 100496 GCGTGATCCGTGTTGTACAGCTCGTTCGGGTTCCAACTCGGCGCGTAGAGAGTGGTTTGG 100555
||| ||||| |||| || ||| |||| |||||| | || | ||| ||
Sbjct 387 CCGTTCACCGTGGTGTAGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGA 328
Query 100556 TAGCCCAAATCGGTGTTT--GACC--AGGCGCCTTTAAAATCGTAGCTCATAAGAAATAT 100611
| |||| ||| ||| || | ||||||| | || ||||||||||| || || ||
Sbjct 327 TGCCCCA----GGTTTTTCAGATCGAAGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGAT 272
Query 100612 TT----TATCGAGAAGCTTTTGCGCAACGTCGTACTGTACCACAGCAATTTTGTCATAGC 100667
| ||||||| | ||||| |||| ||| ||| | || ||||| | ||
Sbjct 271 GTGAACCATCGAGA----TCTGCGCGACGTTGTATGCCACCTTGTCGATCTTGTCCTTGC 216
Query 100668 CGGAACTGATTGCGCTTGTCAACTCGTACGTTTTGCCCGTTTGCAGTTGTAGCTGGTCCA 100727
||| ||||| ||| |||| ||| ||| | ||| |||| | ||||| ||||
Sbjct 215 CGGCGCTGATGGCGGAGGTCAGCTCATACTTGCGGCCGGTTTCCGCCGACAGCTGATCCA 156
Query 100728 GCATCGCGCGCAATTCCTTCAGTAAAATGTTGTACGTGTCGGCGTCGCGCTCCCCGTTGC 100787
||||||| |||| ||| |||| | | || || || |||| || | |||
Sbjct 155 GCATCGCCCGCAGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTC---CTGAGGGCTGC 99
Query 100788 CAAGAGTCGGGTTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCAATGTCCACGCCGTCAA 100847
| ||| ||||||||||||||||||||||||| || |||||||| || ||||||||||| |
Sbjct 98 CCAGATTCGGGTTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGA 39
Query 100848 AAAACTTCCACACCTGCAAAAATTCCTTGACCGAG 100882
| |||||||| ||||| || || || ||||||
Sbjct 38 AGAACTTCCAGGTCTGCAGGAACTCTTTCACCGAG 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414329936387398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |