Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq42801 190 2e-43 >seq42801 Length=1186 Score = 190 bits (210), Expect = 2e-43 Identities = 390/575 (68%), Gaps = 25/575 (4%) Strand=Plus/Minus Query 100319 ATTTGGCGATAATCGACAACGCCGTCTTCCCAAGTGCCGGTCACGGGCCCGGCAGCTGTG 100378 || ||||| || || || | ||||| ||||| ||||| | || ||||||| || ||| Sbjct 564 ATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTG 505 Query 100379 CCTGTGAA---ATAGTTGTCACCGTCATAGCCCGCCACGCCTGTCCAACCGCGGCCGTAC 100435 || ||||| | ||||| || |||| ||| || |||||||||||||| ||| Sbjct 504 CCGGTGAACGGAATGTTGTTCTGGT---AGCCGTTCACCCCGGTCCAACCGCGGCCATAC 448 Query 100436 ATGGCAACGCCCACAATAATTTTGCGCGGGTCCACGCCCTGGTTCGTGAGCAATTTCACG 100495 ||||| ||| || | || |||| ||| | |||||||| | ||| |||||| Sbjct 447 ATGGCGGTGCCGACGACGATCTTGCCCGGCTTGACGCCCTGCGCCAGCAGCGCATTCACG 388 Query 100496 GCGTGATCCGTGTTGTACAGCTCGTTCGGGTTCCAACTCGGCGCGTAGAGAGTGGTTTGG 100555 ||| ||||| |||| || ||| |||| |||||| | || | ||| || Sbjct 387 CCGTTCACCGTGGTGTAGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGA 328 Query 100556 TAGCCCAAATCGGTGTTT--GACC--AGGCGCCTTTAAAATCGTAGCTCATAAGAAATAT 100611 | |||| ||| ||| || | ||||||| | || ||||||||||| || || || Sbjct 327 TGCCCCA----GGTTTTTCAGATCGAAGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGAT 272 Query 100612 TT----TATCGAGAAGCTTTTGCGCAACGTCGTACTGTACCACAGCAATTTTGTCATAGC 100667 | ||||||| | ||||| |||| ||| ||| | || ||||| | || Sbjct 271 GTGAACCATCGAGA----TCTGCGCGACGTTGTATGCCACCTTGTCGATCTTGTCCTTGC 216 Query 100668 CGGAACTGATTGCGCTTGTCAACTCGTACGTTTTGCCCGTTTGCAGTTGTAGCTGGTCCA 100727 ||| ||||| ||| |||| ||| ||| | ||| |||| | ||||| |||| Sbjct 215 CGGCGCTGATGGCGGAGGTCAGCTCATACTTGCGGCCGGTTTCCGCCGACAGCTGATCCA 156 Query 100728 GCATCGCGCGCAATTCCTTCAGTAAAATGTTGTACGTGTCGGCGTCGCGCTCCCCGTTGC 100787 ||||||| |||| ||| |||| | | || || || |||| || | ||| Sbjct 155 GCATCGCCCGCAGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTC---CTGAGGGCTGC 99 Query 100788 CAAGAGTCGGGTTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCAATGTCCACGCCGTCAA 100847 | ||| ||||||||||||||||||||||||| || |||||||| || ||||||||||| | Sbjct 98 CCAGATTCGGGTTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGA 39 Query 100848 AAAACTTCCACACCTGCAAAAATTCCTTGACCGAG 100882 | |||||||| ||||| || || || |||||| Sbjct 38 AGAACTTCCAGGTCTGCAGGAACTCTTTCACCGAG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414329936387398