Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq47809 163 6e-36 >seq47809 Length=786 Score = 163 bits (180), Expect = 6e-36 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 10488 CTCGCCGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTC 10547 || ||||| |||||||| || ||||||||||||||||||||||| |||| || || || Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 10548 GCCCGTACCCTGACGCTGGAATCCGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 10607 ||||| || || |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 10608 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGGCCTGT 10667 || || || | | || ||||| |||||||| || ||| ||| |||||||||| | | Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189 Query 10668 GCCGCCGGTAATGACCTTGA 10687 ||| ||| | ||||| || Sbjct 190 GCCAGCGGCAGCGACCTCGA 209 Score = 91.5 bits (100), Expect = 3e-14 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 11016 CCGGTGGCCGACCGCGTGACCGTGCAGTCTGCCGCCATCGTTGAATATCAGATAAACGCC 11075 ||||||||||| ||||| ||||| | |||||| |||| | || | || | ||| Sbjct 457 CCGGTGGCCGATCGCGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCC 516 Query 11076 ACGCTTTACCTTTACCCTGGTCCCGAAAGCGAACCCAT---TCGCGCTGCCGCTGTGAAA 11132 || ||||| |||||||| || ||| ||||| | ||||||||||| | ||| Sbjct 517 GTACTGTACCTCTACCCTGGCCCTGAAGCAGAACCGGTGCGTCGCGCTGCCGAAGCCAAA 576 Query 11133 AAGCTGGAAGCGTATATCACGGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCC 11192 ||| || || |||| || |||||||| | || || ||||| || |||| || Sbjct 577 ---CTGAAAAATTACATCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCA 633 Query 11193 ATTTATGCCGCTTTGCATGTGGAAGGCGTGCAGCGTGTCGAGCTGGCCGCACCACTGGCC 11252 || || ||||| |||||| ||||| ||||| || || || || | || | |||| Sbjct 634 ATCTACGCCGCACTGCATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCC 693 Query 11253 GACAT 11257 ||||| Sbjct 694 GACAT 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104407570579284