Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq46917 132 1e-26 >seq46917 Length=708 Score = 132 bits (146), Expect = 1e-26 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 22968 TAATAAGGGAGTAGAGTTTCGTCTTCGTGGATATGCAAATCAGGTACATACCCATGATAA 23027 ||||| ||||| || || || || || ||||||||||| || ||||| ||||||||| Sbjct 18 TAATATGGGAGAAGGGTATCTTCCGGATGAATATGCAAATCTGGAACATAACCATGATAA 77 Query 23028 AGGCTGGCGGTAGCTTGCGGATCTGTAGCATCAATCAATAGTACGCGTAAGCCCTGCAAT 23087 || || || || || ||||| || |||||||| |||| | ||||| ||||| | Sbjct 78 AGCGACGCTGTTGCCTGGGGATCAGTGGCATCAATTAATAAGATACGTAATCCCTGTAGC 137 Query 23088 GCTAACCATTGAGCTGTATGCACTGAGGTACTTGTTTTGTATGCGCCACCTTTATGTGCC 23147 || | |||||| || |||| ||||| || |||||| || || || |||||||| ||| Sbjct 138 GCCATCCATTGTGCAATATGTACTGATGTGGATGTTTTATAAGCCCCTCCTTTATGAGCC 197 Query 23148 GCTATAGCCAATACTACTGGGTCTTGCCCATCAGGTCGTTTCCAGCGTGTACCAAA 23203 |||| || | || || || || || || | |||| | || ||| |||||||| Sbjct 198 GCTACTGCGAGAACGACAGGATCCTGACCGGCTGGTCTTGTCGGGCGGGTACCAAA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148078629093654