Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq14068 120 3e-22
>seq14068
Length=5400
Score = 120 bits (132), Expect = 3e-22
Identities = 188/263 (71%), Gaps = 12/263 (5%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTA---ACCTCT 5296
|| || |||||||| ||| || || || | ||||| |||| | ||| |||| |
Sbjct 3096 CCAGTTGAACCGAAACCACCTTCACCACGCACAGTGTCATCCA---GTTTATCGACCTGT 3152
Query 5297 TG-AACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTT 5355
| |||| |||| | | ||||||||||| || | || || || | || || |||
Sbjct 3153 TCCAACT-CTGGATAGAAGATGCGTTCGCAAATGAATTGTGCGATGCGATCGCCGCGCTT 3211
Query 5356 AACCTCAAAGTCGCTGTTTCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAG 5413
|||||||| ||| || |||||| |||||||||||| || || | ||||| ||||||
Sbjct 3212 CACCTCAAAATCG--GTGTCCGAATGGTTAAACAGCACGACTCCCAGGTTGCCGCGGTAG 3269
Query 5414 TCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGT 5473
|| ||||| | |||||| || ||||| || || |||| || || || || || ||||||
Sbjct 3270 TCCTCGTCCACAACGCCGGCACCCACATCAATGAAGTTCTTTACGGCCAGCCCAGAACGT 3329
Query 5474 GGTGCTATGCGTCCGTAGCAACC 5496
|| || | || |||||| ||||
Sbjct 3330 GGGGCCACTCGGCCGTAGGAACC 3352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447481374769040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |