Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq14068 120 3e-22 >seq14068 Length=5400 Score = 120 bits (132), Expect = 3e-22 Identities = 188/263 (71%), Gaps = 12/263 (5%) Strand=Plus/Plus Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTA---ACCTCT 5296 || || |||||||| ||| || || || | ||||| |||| | ||| |||| | Sbjct 3096 CCAGTTGAACCGAAACCACCTTCACCACGCACAGTGTCATCCA---GTTTATCGACCTGT 3152 Query 5297 TG-AACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTT 5355 | |||| |||| | | ||||||||||| || | || || || | || || ||| Sbjct 3153 TCCAACT-CTGGATAGAAGATGCGTTCGCAAATGAATTGTGCGATGCGATCGCCGCGCTT 3211 Query 5356 AACCTCAAAGTCGCTGTTTCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAG 5413 |||||||| ||| || |||||| |||||||||||| || || | ||||| |||||| Sbjct 3212 CACCTCAAAATCG--GTGTCCGAATGGTTAAACAGCACGACTCCCAGGTTGCCGCGGTAG 3269 Query 5414 TCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGT 5473 || ||||| | |||||| || ||||| || || |||| || || || || || |||||| Sbjct 3270 TCCTCGTCCACAACGCCGGCACCCACATCAATGAAGTTCTTTACGGCCAGCCCAGAACGT 3329 Query 5474 GGTGCTATGCGTCCGTAGCAACC 5496 || || | || |||||| |||| Sbjct 3330 GGGGCCACTCGGCCGTAGGAACC 3352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447481374769040