Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq14068 140 3e-28
>seq14068
Length=5400
Score = 140 bits (154), Expect = 3e-28
Identities = 253/363 (70%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560
||||| || || ||||| || ||| | || | | || || ||||| | |||| |
Sbjct 3093 ACGCCAGTTGAACCGAAACCACCTTCACCACGCACAGTGTCATCCAGTTTATCGACCTGT 3152
Query 5561 TCCACATCGGGGAACGCAGC-GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTT 5619
|||| || || | | || ||| ||||| || | || || || || ||||| |||
Sbjct 3153 TCCAACTCTGGATA-GAAGATGCGTTCGCAAATGAATTGTGCGATGCGATCGCCGCGCTT 3211
Query 5620 TACCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAG 5677
||||| |||||| ||| ||||| ||| |||||||| || |||| |||||||||||||
Sbjct 3212 CACCTCAAAATCGGTGT--CCGAATGGTTAAACAGCACGACTCCCAGGTTGCCGCGGTAG 3269
Query 5678 TCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGG 5737
|| |||| | ||||| || ||||| || ||||||| ||| || ||||| || || ||
Sbjct 3270 TCCTCGTCCACAACGCCGGCACCCACATCAATGAAGTTCTTTACGGCCAGCCCAGAACGT 3329
Query 5738 GGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACT 5797
|| ||||| ||||||||| | || || || | || | |||| ||||| | || |
Sbjct 3330 GGGGCCACTCGGCCGTAGGAACCCTCCGGTACTTGGACTTGCAAATCCGTCTTGA-CAAT 3388
Query 5798 CGCC-GACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGCAGAGGTCGTACCCGGCCGC 5856
||| ||| | |||||||| | |||| | ||||||| || || | ||||| ||
Sbjct 3389 GGCCTTACCCCGTGCAGGGACCGTAATGTCGTAGGCGCTGCGAAGATCAAAACCGGCGGC 3448
Query 5857 CCG 5859
||
Sbjct 3449 ACG 3451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429802467009704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |