Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq47809 136 8e-28 >seq47809 Length=786 Score = 136 bits (150), Expect = 8e-28 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 10793 CTTGCGGAACGCATTGCGACGCTGATTTCGCTCTATCCCGAAGACCAGCAGGAAGCCATC 10852 || || || |||| || ||||||||||| || || || ||||| |||| ||||||||| Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 10853 GCCCGGACGCTCGCACTTGAGTCTGAGCCAATTGTTAAATTGCTGCAGGAAAACGCCTAC 10912 ||||| || | || || || || ||||| || || ||| || |||| ||||| || ||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 10913 CGTGAGGTTATCTGGCGTCAGCGTGTCAATGAAGCTGCACGCGCAGTGATGCTGGCTTAT 10972 || || | | | || ||||| || |||||||| ||| || |||||||||| |||| Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGGGTTAT 189 Query 10973 GCCATAGACAGTGACCTCGA 10992 |||| | ||| |||||||| Sbjct 190 GCCAGCGGCAGCGACCTCGA 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97857711345492