Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2274 86.0 5e-12 >seq2274 Length=37031 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | | ||| || || || || |||||| || |||||||| |||| Sbjct 30386 ACCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 30327 Query 48559 CA-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 | | || || | |||||||||||||| || || | || | |||||||||||| | Sbjct 30326 AAGAGTG-CGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAG 30268 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || ||||||||| || || ||||| | | | |||||||| | | |||| Sbjct 30267 GAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCA 30208 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || || || | || || || ||||||||||| Sbjct 30207 CCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421004424070067