Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq2479 116 2e-21 seq31788 82.4 4e-11 >seq2479 Length=33888 Score = 116 bits (128), Expect = 2e-21 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| |||| || | ||||||||||| |||||||||| ||||||||||||||||| Sbjct 6723 AAATAAAAAAATATACAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 6664 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||| ||||||||||||||| Sbjct 6663 GCACGACGCTCTAACCAGCTGAGCTAATGGGCC 6631 >seq31788 Length=2121 Score = 82.4 bits (90), Expect = 4e-11 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 11483 CCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 238 CCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCCGT 286 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261338014124092