Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1210 158 2e-34
seq1998 114 2e-21
>seq1210
Length=4457
Score = 158 bits (174), Expect = 2e-34
Identities = 195/267 (73%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | | | || || ||||||||||| ||||| || ||||||||
Sbjct 1209 GCTAAACGTCATCGAAAAGTTTTGCGTGACAACATCCAAGGCATCACAAAACCAGCTATT 1150
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| | || |||||||| || || ||||| | ||||| | | |||||||| | |
Sbjct 1149 CGTCGTTTAGCCCGTCGTGGCGGCGTAAAGCGCATATCTGGTCTTATTTATGAAGAAACT 1090
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||||||||| | ||| | ||| || || | |||||| || ||| || ||
Sbjct 1089 CGTGGTGTTTTGAAAGTGTTCTTGGAGAATGTCATTCGTGATGCCGTCACCTACACTGAA 1030
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | |||||||| || | |||||| | || ||||| |||| | ||||||
Sbjct 1029 CACGCCAAGAGGAAGACTGTAACGGCAATGGATGTTGTTTATGCGCTGAAGAGACAAGGC 970
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || |||||||| |||||
Sbjct 969 CGCACCCTATACGGTTTTGGCGGTTAA 943
>seq1998
Length=6633
Score = 114 bits (126), Expect = 2e-21
Identities = 105/130 (81%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||||||| || | | | || ||||||||||| || ||||| ||||| ||||
Sbjct 555 CGCCAAGCGTCATCGCAAGGTGT-TGCGTGATAACATCCAGGGTATCACTAAGCCGGCTA 613
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| ||||| ||||| || ||||||||| |||| || || ||||||| ||||
Sbjct 614 TTCGCCGTCTTGCTCGCCGTGGCGGTGTCAAGCGTATCTCCGGTCTGATCTATGAGGAGA 673
Query 16551 TTCGTGATGT 16560
||||| |||
Sbjct 674 CTCGTGGTGT 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79031252005431
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |