Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq3773 86.0 1e-11 >seq3773 Length=92101 Score = 86.0 bits (94), Expect = 1e-11 Identities = 213/321 (66%), Gaps = 2/321 (1%) Strand=Plus/Plus Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 || ||| |||| |||| ||||| ||| |||||||| || | || | | ||| Sbjct 53169 GCCAAGATGTACGGTTTCTGGATTGTCATCAATTATCGGGAAGCCTACGACATGTTCGCC 53228 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 | || || |||||||| ||||| |||| | |||| || | ||||| || || Sbjct 53229 TGCAACGGGATACTCTTCAACCACGAGAGTCCACGGCGAGGCGAAAACTTTGTGACACGC 53288 Query 194001 AAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTT-ATCTTGG 194059 ||||| |||| | | | | ||||| | | || || | | || |||| | || || Sbjct 53289 AAGATAACACGATCTGTGGCCAAGATAT-TACTGAATCAAATGGAATACTTTGAGCTCGG 53347 Query 194060 TAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTT 194119 ||| | | | ||| | ||||||||||| || | || ||||| || || |||||| | Sbjct 53348 CAATTTGGACTCAAAGCGCGATTGGGGACATGCCAGCGACTATGTGGAGGCCATGTGGAT 53407 Query 194120 AATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTGT 194179 |||||||||| ||| || | ||| ||||| ||||| || || ||| || ||| Sbjct 53408 GATGTTGCAACGGGAGAGTCCAGCTGACTATGTTATTGCAACCGGAGAAACACATAGTGT 53467 Query 194180 TAGAGACTTTGTGAATGAAGC 194200 |||| |||||| | | ||| Sbjct 53468 ACGAGAATTTGTGGAGGCAGC 53488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807069990552520