Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2144 275 2e-68 >seq2144 Length=13752 Score = 275 bits (304), Expect = 2e-68 Identities = 625/930 (67%), Gaps = 19/930 (2%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| |||| ||||| ||||| ||| || | | |||||||| | ||| Sbjct 3103 TATTTT-GGATTCAAGACTTTGGAGCGATCGTATTTGTTAAAAATCAATGGCAAAGTTGC 3161 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||||| || ||||| ||| | ||||| ||||| || ||||| ||| | ||| |||| Sbjct 3162 TGAACGTCCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGA 3221 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566 | |||| | || || || || | || | || | ||||| || ||| | ||||| Sbjct 3222 TTCCGCACTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAAC 3281 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | | | |||| ||| || ||| ||||||| |||||||| || | ||| Sbjct 3282 ACTTTTCGCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCACCATGGT 3341 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 || || |||||||| |||||| | | | || | ||||| | || || ||| Sbjct 3342 ATCTGACTCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTC 3401 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCGC 363744 ||||| || |||||| | || || || |||| || || | || ||| | Sbjct 3402 AGCAGGTGGTATTGGTCTGA--ATGTGCATTGCATTCGGGCCAAGGGAACTTCGATTAGT 3459 Query 363745 GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||| || ||| || ||||| ||||||| ||||| | || ||| ||||| || Sbjct 3460 GGCACCAATGG-TACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGC 3518 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || || || |||||||| || || | || || ||||| || || |||||||| Sbjct 3519 ACGTTATGTGGATCAGGGTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCC 3578 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 | ||| ||||| | |||||||| | || || ||| ||||| || ||||||||| Sbjct 3579 TTGGCATTCCGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGAACA 3638 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || |||||||||||||| || ||| | | || ||||||||||||||||| Sbjct 3639 TCGTGCTCGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGA 3698 Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 || | || |||||||||| | ||||| ||| | |||||||| || | ||||| || Sbjct 3699 AGCCAATGAGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTG 3758 Query 364044 GGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC---TCGT 364098 |||||| | | | | ||||||||| ||| || || |||||| || |||| Sbjct 3759 GGGTGATAAGTTTGAGGAGCTCTATAC--AAAATACGAGAAGGAGGGTCGAGCAAATCGT 3816 Query 364099 AAGA-CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | ||| || || || |||||||||||||| || || || | ||||| || Sbjct 3817 GTTATCAA----GGCTCAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGG 3872 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 ||||| || ||| | | ||| |||||||| ||||||||| |||||| || | | || Sbjct 3873 CACACCGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGG 3932 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 |||||| | || ||| | || || || ||| |||| || | || || || |||| Sbjct 3933 CACAATTAAATGCAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGAT 3992 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||| || || || | || ||||| || || Sbjct 3993 TGCTGTTTGCAATTTGGCATCGATAGCTCT 4022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302550918688394