Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 275 2e-68
>seq2144
Length=13752
Score = 275 bits (304), Expect = 2e-68
Identities = 625/930 (67%), Gaps = 19/930 (2%)
Strand=Plus/Plus
Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446
|||||| |||| ||||| ||||| ||| || | | |||||||| | |||
Sbjct 3103 TATTTT-GGATTCAAGACTTTGGAGCGATCGTATTTGTTAAAAATCAATGGCAAAGTTGC 3161
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||||| || ||||| ||| | ||||| ||||| || ||||| ||| | ||| ||||
Sbjct 3162 TGAACGTCCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGA 3221
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566
| |||| | || || || || | || | || | ||||| || ||| | |||||
Sbjct 3222 TTCCGCACTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAAC 3281
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| | | | |||| ||| || ||| ||||||| |||||||| || | |||
Sbjct 3282 ACTTTTCGCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCACCATGGT 3341
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
|| || |||||||| |||||| | | | || | ||||| | || || |||
Sbjct 3342 ATCTGACTCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTC 3401
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACATTCGC 363744
||||| || |||||| | || || || |||| || || | || ||| |
Sbjct 3402 AGCAGGTGGTATTGGTCTGA--ATGTGCATTGCATTCGGGCCAAGGGAACTTCGATTAGT 3459
Query 363745 GGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||| || ||| || ||||| ||||||| ||||| | || ||| ||||| ||
Sbjct 3460 GGCACCAATGG-TACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGC 3518
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || || |||||||| || || | || || ||||| || || ||||||||
Sbjct 3519 ACGTTATGTGGATCAGGGTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCC 3578
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
| ||| ||||| | |||||||| | || || ||| ||||| || |||||||||
Sbjct 3579 TTGGCATTCCGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGAACA 3638
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| || |||||||||||||| || ||| | | || |||||||||||||||||
Sbjct 3639 TCGTGCTCGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGA 3698
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
|| | || |||||||||| | ||||| ||| | |||||||| || | ||||| ||
Sbjct 3699 AGCCAATGAGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTG 3758
Query 364044 GGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC---TCGT 364098
|||||| | | | | ||||||||| ||| || || |||||| || ||||
Sbjct 3759 GGGTGATAAGTTTGAGGAGCTCTATAC--AAAATACGAGAAGGAGGGTCGAGCAAATCGT 3816
Query 364099 AAGA-CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157
| ||| || || || |||||||||||||| || || || | ||||| ||
Sbjct 3817 GTTATCAA----GGCTCAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGG 3872
Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
||||| || ||| | | ||| |||||||| ||||||||| |||||| || | | ||
Sbjct 3873 CACACCGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGG 3932
Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
|||||| | || ||| | || || || ||| |||| || | || || || ||||
Sbjct 3933 CACAATTAAATGCAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGAT 3992
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCT 364307
||| || || || | || ||||| || ||
Sbjct 3993 TGCTGTTTGCAATTTGGCATCGATAGCTCT 4022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302550918688394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |