Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 215 5e-51
seq2274 122 8e-23
seq7704 111 1e-19
>seq2144
Length=13752
Score = 215 bits (238), Expect = 5e-51
Identities = 731/1122 (65%), Gaps = 50/1122 (4%)
Strand=Plus/Minus
Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114
||||| || ||||||||||| || | || ||| || | || | ||| || ||| ||
Sbjct 4586 TGATTCACAACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAG 4527
Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174
||||| ||||| || ||||| |||| || || || |||| ||| || ||||| ||
Sbjct 4526 GGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCG 4467
Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234
| | | ||||| |||| |||||||| | || | ||||| || | |||| |||
Sbjct 4466 ATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCC 4407
Query 145235 CATAGCGAAGTCGG--CCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGG 145292
|| || || || ||| | | |||||| || ||||| | ||| |||| ||| | |
Sbjct 4406 CAGAGATTTGTGGGTACCTTA--TTCCACATATCATACTGGAGAATACCCTTGCTAACTG 4349
Query 145293 GGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCA 145352
| || || | | ||| || |||| | | || ||||| || || || ||||
Sbjct 4348 GACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCA 4289
Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG-CAGCAT---CGCTTCATCG 145408
||||| | ||||| || ||| ||| | ||||||| ||| | ||| | |||
Sbjct 4288 ATGCGCCATAGTAAATGGTTTCG--AATAT--CTGTTGATTCAGAAGACACGCCTTATCA 4233
Query 145409 CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCG 145468
||||| || || |||| | | |||||||| || || || || | ||| | ||
Sbjct 4232 CTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCA 4173
Query 145469 ATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGG 145525
|| || |||||| | | |||| || | ||| ||| | ||| || |||
Sbjct 4172 ATTGGACGATGTCTTAAGTTGGATTTCTTAGCC---TCGGGCAGAGGGTAGTAATTGATA 4116
Query 145526 TCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAG 145585
||||| || || ||||||||| || | ||| || | | | ||| |||||
Sbjct 4115 TCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAG 4056
Query 145586 TCAAACCGAGCCTC--GTCA-ACGACCACACAGCTATTGACGGCGATCGACGCCAAATTA 145642
|| || ||| || |||| || |||||| || ||||| ||||||||
Sbjct 4055 TCGTACGTCTTCTCCGGTGTTACGAACA------TATTGAGAGCTATCGATGCCAAATTG 4002
Query 145643 CAAACTGCCGTCTCCTCGGCGTCGCTGTATTGT--ACGATCTCGGCGCACAAATTGCTAC 145700
||||| || |||| || | || || | || | || || || | |||||| || || |
Sbjct 4001 CAAACAGCAATCTCATCTG-GT-GCAGAATACTCAACAATTTCAGTGCACAAGTTACTGC 3944
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
|||| || || |||| |||||| || || || || | ||| |||| |||||| ||||||
Sbjct 3943 ATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCA 3884
Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT-------AAAACGGTGCAAGTCC 145813
|||||||| |||||||||||| || | ||| | ||| ||| || || |
Sbjct 3883 TGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCT 3824
Query 145814 TGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCA 145873
|| | ||| |||| || ||||| | |||||||| | ||||||||||||
Sbjct 3823 TGATAA--CACGATTTGCT-----CGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCA 3771
Query 145874 AACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCAT 145933
||| ||| | ||| | || || |||||||||| || |||||||| |||||
Sbjct 3770 AACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAA 3711
Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993
| | ||||| | ||||||| ||||||||||||||| | |||||| || || | ||
Sbjct 3710 TCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGA 3651
Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAAT-TAAGCACACTATAGAT 146052
|| || || ||||| || |||| ||| | || ||| || | | |||
Sbjct 3650 TCCCGAGCACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTC-AAAGAC 3592
Query 146053 GTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTG 146109
|| | ||||| || || | || | ||| | ||||| || ||| |||||||||
Sbjct 3591 ATCGGAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTG 3532
Query 146110 GTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGG 146151
||||| | |||| ||| |||||||| || | || ||| ||
Sbjct 3531 ATCCACATAACGTGCCACATTGTTAAATACTCTCAGCATAGG 3490
>seq2274
Length=37031
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| || |||||||| ||
Sbjct 30385 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 30326
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||||||||| || |||||
Sbjct 30325 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 30266
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | ||| | ||||| | | ||| |
Sbjct 30265 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACC 30206
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || | || || ||||||||||||||
Sbjct 30205 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159
>seq7704
Length=29863
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| || || | || ||||| || |||||||||||||||
Sbjct 18576 CCACCACGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAG 18517
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || | |||||||| || |||| ||||||||||| || |||||
Sbjct 18516 AGAGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGA 18457
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||||||||| ||| | | || |||| | || | ||||| | | ||||
Sbjct 18456 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGAC 18398
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| ||||| || || ||||| ||||| ||||||||
Sbjct 18397 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471729197009280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |