Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq42801 98.7 8e-16 >seq42801 Length=1186 Score = 98.7 bits (108), Expect = 8e-16 Identities = 204/303 (67%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 96300 GCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGTCG 96359 ||||| | || ||||||||||| || || || | | | | | ||||| |||| | Sbjct 303 GCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATCGAGATCTGCGCGACGTTG 244 Query 96360 TATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACGTT 96419 ||| || | || ||||| | |||||| ||||| || |||| ||| ||| | Sbjct 243 TATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATGGCGGAGGTCAGCTCATACTTG 184 Query 96420 TTGCCCGTTTGCAGTTGCAACTCGTCTAACATCACGCGCAATTCCTTTAATAGAATGTTG 96479 ||| |||| | || || || | |||| | |||| ||| || | || | Sbjct 183 CGGCCGGTTTCCGCCGACAGCTGATCCAGCATCGCCCGCAGTTCTTTCATCAGCAGCACA 124 Query 96480 TACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTCGGGTTGGCGCCTTTACCGCCCGGA 96539 || || || |||| || | |||| || |||||||||||||||| |||||||| Sbjct 123 TAAGTTTCCCCGTC---CTGAGGGCTGCCCAGATTCGGGTTGGCGCCTTTGCCGCCCGGG 67 Query 96540 AATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTCTGACG 96599 |||||||||||||| ||||| |||||||| || ||||| ||||| || ||| | || Sbjct 66 AATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAGGTCTGCAGGAACTCTTTCACC 7 Query 96600 GAG 96602 ||| Sbjct 6 GAG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404850692740330