Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 488 7e-133
seq19922 170 2e-37
>seq2144
Length=13752
Score = 488 bits (540), Expect = 7e-133
Identities = 1248/1886 (66%), Gaps = 34/1886 (2%)
Strand=Plus/Minus
Query 61837 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 61896
|| ||| || | || || ||||| | | || ||| || || || || ||||| |||||
Sbjct 4935 ATTCTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACAT 4876
Query 61897 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACT 61956
||| ||||| ||||| |||| | | ||||| || || || || |||| |
Sbjct 4875 TCCTGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATT 4816
Query 61957 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62016
|| || |||| ||| ||||| | |||||||||||||| ||||| ||||| | |||||
Sbjct 4815 TGGTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGC 4756
Query 62017 AGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT---CGCTT 62073
|||||||| || | | |||| | |||||||||| || ||||| | | |||
Sbjct 4755 TGCCATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC-- 4698
Query 62074 AATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATT 62130
| || || |||| |||| | || || ||||| |||| | ||| || || |||
Sbjct 4697 -ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATT 4639
Query 62131 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 62190
|| || ||||||| ||| || | ||||||| | | | | | ||| |||| ||
Sbjct 4638 TTTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCAC 4579
Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250
|| ||||| |||||||||| |||| | ||||| || || || || ||||| |
Sbjct 4578 AACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAA 4519
Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310
||| |||||||| |||| || || || || ||||| || ||||| ||||| | | |
Sbjct 4518 AGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAG 4459
Query 62311 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTC--CCAATTCCAAAGA 62368
| ||| | | |||| | || || || || || ||| ||| ||| | ||| |||
Sbjct 4458 AGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTT--GAGTTTCGCCCAGTCCCAGAGA 4401
Query 62369 TCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCC 62427
| | ||||| || |||||||| || || | | || ||
Sbjct 4400 TTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341
Query 62428 TACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 62487
| |||| || || || | || || |||||||| || ||||| || || || ||||| ||
Sbjct 4340 T-CATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCC 4282
Query 62488 GTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGG 62547
|| |||||||||||||| |||| | ||| ||| ||| | || ||| | ||
Sbjct 4281 ATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG 4222
Query 62548 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62607
||| | | ||| || || ||||| | ||||||||| ||||| || || || | |||
Sbjct 4221 ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATG 4162
Query 62608 TCTCTTATTAGAGATTTC--AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62665
||| | | | | |||||| ||| || || | ||| || ||||| ||||| || || ||
Sbjct 4161 TCT-TAAGTTG-GATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTG 4104
Query 62666 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCA 62725
|| | ||| || || | ||| || || || || || | ||| || | |
Sbjct 4103 TTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTC 4044
Query 62726 TC---TATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62782
|| | |||| ||||| || | || | ||||||| ||| ||||| || | |||||
Sbjct 4043 TCCGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCT 3984
Query 62783 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 62842
| | | ||| | | || |||||||| | ||||| || || || || || | ||||
Sbjct 3983 GGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTT 3924
Query 62843 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 62902
||||| || ||||| |||||||| |||||| | || ||| | || || ||||| ||
Sbjct 3923 TGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCC 3864
Query 62903 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GATTTGTATCT 62961
| || || || || || || ||| | | | ||||||| || | | |||||| ||
Sbjct 3863 ACTTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTG---CT 3807
Query 62962 CTTTTCTCTTTC--GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC 63019
| ||| ||| |||| |||||| | || |||| || |||||||||| |
Sbjct 3806 CGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCG 3747
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
||||| ||||| | | ||| ||||||| ||||| || | | | | ||| || |||
Sbjct 3746 AGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTC 3687
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTT 63138
||||| | ||| || ||||| || || ||| || ||||| | | | ||||||||| ||
Sbjct 3686 ATAAACAAATCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTTT 3628
Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198
|| || ||||| |||||||| | |||| | | | ||| |||||||| || || | |||
Sbjct 3627 GCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTA 3568
Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258
||||| | | ||||||| | |||| || |||||||| | || | || || ||
Sbjct 3567 AATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTT 3508
Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318
| | ||||||| ||| |||| | |||||||||||||||||||| || || | |
Sbjct 3507 AAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGT 3448
Query 63319 TCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376
||| |||| ||||| | | | ||| ||||| || || ||||| || |||||
Sbjct 3447 TCCCTTGGCCCGAATGCAATGCACATT--CAGACCAATACCACCTGCTGACTTTGAGATC 3390
Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436
| || || | | | | | | |||| ||||| || ||| | |||| | ||
Sbjct 3389 ATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGG 3330
Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496
||||| || ||||| || | || | ||| | || || | || || || ||
Sbjct 3329 AGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCA 3270
Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556
|| || || | ||| ||||| | |||||| ||||| | || || || ||||| |
Sbjct 3269 TGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCT 3210
Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616
||| || || | || || ||||| | ||||||||| || | |||| | | |||
Sbjct 3209 CCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCA 3150
Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676
|| ||||| ||||| || ||| |||||||| || || |||||||| || || |||
Sbjct 3149 TTGATTTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATAGCCAAAA 3090
Query 63677 TCTCGTTCGTAAATAATAACCGAGTT 63702
|| || ||||| ||||| | |||||
Sbjct 3089 TCACGATCGTATATAATGGCAGAGTT 3064
>seq19922
Length=1369
Score = 170 bits (188), Expect = 2e-37
Identities = 360/535 (67%), Gaps = 3/535 (1%)
Strand=Plus/Minus
Query 32664 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 32723
|| |||||||| || || |||||||| | || | || || || || || || |||
Sbjct 1214 GCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCG 1155
Query 32724 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 32783
||||| || |||||||| || ||||| || || |||||||| || ||||| ||
Sbjct 1154 GGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATG 1095
Query 32784 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCTGTCATGTA--TC 32840
||||| || || ||||||||||| | | ||| ||| | || || || | | ||
Sbjct 1094 CCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAGATC 1035
Query 32841 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 32900
|| |||||||||| ||||| || ||| ||||| || || || ||||| |||
Sbjct 1034 CAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAG 975
Query 32901 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 32960
|| |||| | || ||| || || || || || | | || |||||||||
Sbjct 974 AGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCC 915
Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020
|| || | || || ||||| || || || || || ||||| | ||||| || || ||
Sbjct 914 GAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTGC 855
Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080
||||| | || || || | | ||| ||||| || || |||||| ||| |||||
Sbjct 854 ACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAAG 795
Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 33140
|| ||||| |||||| || || | || | ||||||| | ||| || |
Sbjct 794 AAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGTC 735
Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCtttt 33195
|| || || |||| ||||||||| ||||| ||||| ||||| || || |||||||
Sbjct 734 ATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633251290133200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |